PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000372.1.g00005.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 324aa    MW: 36288.4 Da    PI: 6.3521
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000372.1.g00005.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like40.94.6e-132045126
                         G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                                    kprl+WtpeLH+rFveav+qLGG+ k
  FANhyb_rscf00000372.1.g00005.1 20 KPRLKWTPELHQRFVEAVNQLGGHTK 45
                                    79*********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.7E-111845IPR009057Homeodomain-like
PfamPF143798.8E-22106152IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGLQNMQNQN MNLVLSTDAK PRLKWTPELH QRFVEAVNQL GGHTKDSDED DGNSWTDFKY  60
RLGKSQQSEN CSDSLQEDNK EIQSSDGHFC TDINDETHSQ INESAQIAQS LKLQMEVQRK  120
LHEQIEVQRH LQLRIEAQGK YLQSVLKKAQ ETLSGYNSSS VGVELAKAEI SQLVSMVNTG  180
CPSSSFSELT ETRTPTLKDI ERKHIRDTIC SMESSLTSSE SSGRKEEKFK TTCVELPLME  240
IHPEVKPLNN VTSNQNHGIG RKRSISSSIS DGICVEQPVA KRSSATQRDK SGNHLRLVTI  300
DLNSKYQNDI DSGPKVLDLN CKGI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011463063.10.0PREDICTED: uncharacterized protein LOC101303116 isoform X1
SwissprotF4I2743e-67PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A2P6R2W10.0A0A2P6R2W1_ROSCH; Putative sterol 14-alpha-demethylase transcription factor MYB-HB-like family
STRINGXP_004297295.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.15e-65G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]