PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000362.1.g00002.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family CPP
Protein Properties Length: 1068aa    MW: 113619 Da    PI: 7.1745
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000362.1.g00002.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR44.62.9e-14393432242
                             TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                                     ++k CnCk+s+Clk+YCeCfaag +C+  C+C +C+N+ ++
  FANhyb_rscf00000362.1.g00002.1 393 KQKLCNCKNSRCLKLYCECFAAGIYCKG-CNCINCHNNVDH 432
                                     7899************************.********9875 PP
2TCR49.39.5e-16474512139
                             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                                     k++kgC C+ks ClkkYCeCf+a++ Cse+CkC dCkN 
  FANhyb_rscf00000362.1.g00002.1 474 KHHKGCACRKSGCLKKYCECFQANVLCSENCKCMDCKNF 512
                                     589***********************************5 PP
3TCR49.39.5e-16701739139
                             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                                     k++kgC C+ks ClkkYCeCf+a++ Cse+CkC dCkN 
  FANhyb_rscf00000362.1.g00002.1 701 KHHKGCACRKSGCLKKYCECFQANVLCSENCKCMDCKNF 739
                                     589***********************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561761.73E-2071198IPR016166FAD-binding, type 2
Gene3DG3DSA:3.30.43.102.2E-691160IPR016167FAD-binding, type 2, subdomain 1
PROSITE profilePS5138710.14894303IPR016166FAD-binding, type 2
PfamPF015658.1E-1398188IPR006094FAD linked oxidase, N-terminal
SMARTSM011146.2E-17392432IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163435.369393514IPR005172CRC domain
PfamPF036382.9E-11395429IPR005172CRC domain
SMARTSM011141.1E-18474515IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.8E-12477512IPR005172CRC domain
PROSITE profilePS5163424.25620741IPR005172CRC domain
SMARTSM011141.1E-18701742IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.8E-12704739IPR005172CRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0016614Molecular Functionoxidoreductase activity, acting on CH-OH group of donors
GO:0050660Molecular Functionflavin adenine dinucleotide binding
Sequence ? help Back to Top
Protein Sequence    Length: 1068 aa     Download sequence    Send to blast
MNMEAKMASS SSSSSYVVTS SLFSFCFVFS FCFFFSSVSS ASSIDLNYGQ TFAHCIGSHS  60
SNNLSNLVYG SDDRSFSTVF HSSIQNLRFY NTTPNQNPQS IITPYNLTHV QAAIICSKKL  120
GLQVRIRSGG HDYEGLSYKS DVPFIIIDLV NLNNVRVDNK EATAWVQSGA TLGELYYHVA  180
TNSTGSLGFP GGTCPSVGPN SILSDRIREF PVASDSVSVS STREINDGAE RNGFRYGAEE  240
IGEAIGFHGA GSAFRQRCVA GAVWTGRGSA TAAAAGVSAA DASSAGASTD AAVGTATVTV  300
AAAAAAGAKL TGAAGVTVAA AGDGGGAIAE AVSDAGGFAL SGEAGGADDA GEWPDCALAT  360
EIGAEGERRL KFRRYESPKP RARSEAKDST PKKQKLCNCK NSRCLKLYCE CFAAGIYCKG  420
CNCINCHNNV DHEAARQDAV GAILERNPKA FRPKIASSPH ESRDSWEDAG EVQKHHKGCA  480
CRKSGCLKKY CECFQANVLC SENCKCMDCK NFDGSEERRA IFHEDHNTVA NVQQANAAIS  540
GAVGSSGFGP LVSRQRPSDE LFSGIGARDQ SAHRITHTQQ ENHLRPPMAS SSLLSVPTSV  600
TPIAAVPGSS KPTYRSMLAN IIQPENIKDL CSRLVVVSGE AAKAFAGCNC INCHNNVDHE  660
AARQDAVGAI LERNPKAFRP KIASSPHESR DSWEDAGEVQ KHHKGCACRK SGCLKKYCEC  720
FQANVLCSEN CKCMDCKNFD GSEERRAIFH EDHNTVANVQ QANAAISGAV GSSGFGPLVS  780
RQRPSDELFS GIGARDQSAH RITHTQQENH LRPPMASSSL LSVPTSVTPI AAVPGSSKPT  840
YRSMLANIIQ PENIKDLCSR LVVVSGEAAK AFAENRQKEM VDKTATVSAT GEGKESKTEQ  900
DQNSAHGRDG SSGSGSDGGD AQNSRPMSPG TLALMCDEQD KMFMAAEPPN GITTNSQSTT  960
QNPSQEIGCT EVYEEQERVV LSGFRDFLNL LITRGSIKET MCSPVAKRER EIQKDSVEVG  1020
TPKNPRYEKV TYSNDIGKSP ASTNGKVLQS VVNYVSGVGL PLKNNTGQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3vte_A3e-40501975152Tetrahydrocannabinolic acid synthase
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004291193.10.0PREDICTED: protein tesmin/TSO1-like CXC 6
SwissprotQ9SZD11e-100TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A2P6PZZ20.0A0A2P6PZZ2_ROSCH; Putative transcription factor Tesmin family
STRINGXP_004291193.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26263379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.11e-90Tesmin/TSO1-like CXC domain-containing protein