PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000297.1.g00008.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 451aa    MW: 49951.7 Da    PI: 9.9464
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000297.1.g00008.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034203225223
                                     EETTTTEEESSHHHHHHHHHH.T CS
                         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                                     +Cp Cg  F   +nL+ H+ + H
  FANhyb_rscf00000297.1.g00008.1 203 SCPECGAIFMKAENLELHQAVrH 225
                                     8******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.808202230IPR007087Zinc finger, C2H2
PROSITE patternPS000280202225IPR007087Zinc finger, C2H2
SuperFamilySSF563994.41E-16227395No hitNo description
Gene3DG3DSA:3.90.228.102.0E-11228391IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MSTTMAKPKS QRKPTKPTHQ KIKKQNQNQN QNPQNKPEIK PPYWAVVRGL LTCKHLQAVQ  60
LLQQEGKHHP QKQQSEQLAA MEESKKCKKM RCSGSLCSNT KITHRPELGS PEVHKKRASS  120
MGCSSSSTNE TSSRSMKAPL HELNGVVSTS SSSLSASSNI SSAGGSFRAM PFRRFSGCYE  180
CRMVVDPVLG FTRDPSLRGS ICSCPECGAI FMKAENLELH QAVRHAVSEL GPEDTSKNIV  240
EIIFQSSWLK KQAPICKIDR ILKVHNTQKT ISKFEEYRDS IKAKATKLQL PNKKHPRCIA  300
DGNELLRFHC TTFDCSLGLN GSSNLCNSIP SCNVCSIIKN GFKVDRSELA GSSGILTTAT  360
SGRAHDMAEV AAEDGRRAML VCRVIAGRVK KNADGQGGMA VVVGWKSTTR WPELWGCIRI  420
WMSCMCLIPR LFCLVLLSYM EGFRFHVDYG N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004290833.10.0PREDICTED: uncharacterized protein LOC101294815
TrEMBLA0A2P6PX120.0A0A2P6PX12_ROSCH; Putative transcription factor C2H2 family
STRINGXP_004290833.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84732128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-86C2H2-like zinc finger protein