PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000253.1.g00009.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 555aa    MW: 60295.9 Da    PI: 7.1234
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000253.1.g00009.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.7e-10391449563
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  ++ +l+  +  l+se+
  FANhyb_rscf00000253.1.g00009.1 391 KRAKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQVTKLQRDSMGLTSEN 449
                                     9***********************************************99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-18387451IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.898389452IPR004827Basic-leucine zipper domain
PfamPF001703.6E-9391449IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-11391441No hitNo description
SuperFamilySSF579591.21E-10391442No hitNo description
CDDcd147031.99E-23392441No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MEGSDETGSG KQRPNTPFGS SPSASFARPN HHLDIPNFSS AQIGLPMRQL SPAPSPETSK  60
RLGIPPSHPN NPMRPQPPSW NLSSSGGSAH SRSLSQPAFF SLDSLPPLSP LTSYREPAAS  120
SLSDPNSADV NMEESVVNSH AAQSMRSPVT DGNPFWAGEG LPPRRGHRRS NSDVPLGFSA  180
VIQSSPQLIP IGRRACFDGK EGVGAAKPVQ LVRQGSSGDN NCEVMGDRKS GGEVVDDLFS  240
AYMNLENIDK MNSPGGEDKD LDSRASGSKN GGESSDNEVE SGVNGKWSSS GFSSEKREGG  300
KRAAGGDAVR TVRHCRSVSM DSYMDNLNFD DELLKPLPLG SQVGQLSPST SVDGNSAKFS  360
MEFGSGEFNA IELKKIMESE KLSEIAVSDP KRAKRILANR QSAARSKERK MRYIVELEHK  420
VQTLQTEATT LSAQVTKLQR DSMGLTSENK ELKFRLQAME QQAQLKDALN EALTGDVQRL  480
RISAAELGGE GNLSNRMSQQ LSINQQMLQL QQLNLYQMHQ QPQQQTQQQM MQQPQQNRPP  540
SHQQNGSASK HESMQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004291397.10.0PREDICTED: transcription factor RF2a-like
TrEMBLA0A2P6PZ330.0A0A2P6PZ33_ROSCH; Putative transcription factor bZIP family
STRINGXP_004291397.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-116bZIP family protein