PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000241.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | STAT | ||||||||
Protein Properties | Length: 762aa MW: 84851.7 Da PI: 6.4209 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 171.7 | 1.3e-53 | 218 | 335 | 1 | 118 |
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcd 79 ldvvll+a++++++k++ev+asL y d+g++v+k++d e+pLL+ dG+ef+s drp+k+++GrasfklkisqLsskcd FANhyb_rscf00000241.1.g00010.1 218 LDVVLLDAFSHTINKELEVIASLAYYDNGAHVDKTSDGEPPLLAIHDGIEFASCDRPTKVVQGRASFKLKISQLSSKCD 296 8****************************************************************************** PP STAT 80 nrLfrikfeipklkkypfleavskpirCisrsrntrsss 118 nrLfri f+ip+ ++ypfl+a++ pirC+s s+n+ ss FANhyb_rscf00000241.1.g00010.1 297 NRLFRIIFQIPNWENYPFLKAFTPPIRCVSPSHNAVVSS 335 ********************************9987665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13385 | 3.0E-6 | 6 | 135 | No hit | No description |
Gene3D | G3DSA:2.60.120.200 | 2.8E-7 | 19 | 161 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
SuperFamily | SSF49899 | 2.45E-10 | 22 | 164 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
Gene3D | G3DSA:3.30.505.10 | 3.4E-7 | 596 | 668 | IPR000980 | SH2 domain |
SuperFamily | SSF55550 | 7.32E-8 | 598 | 696 | IPR000980 | SH2 domain |
PROSITE profile | PS50001 | 9.485 | 604 | 697 | IPR000980 | SH2 domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 762 aa Download sequence Send to blast |
MATKSDEYLP LKDFRVEIDD KQPTFSVCFW LYLSSSTTFP ATLIQVHSGA AGNSPFLVIR 60 ENKKLRLYLM GLLPRKAADQ CGSASLSEVP HIDVWSQFPM EKWVHVGWEV SSDFVRLHID 120 GEDVGNKDIS SLFNKDSIST GLSKISLAFC GGDGNNMQGY VHHPNVLPLT SSIMEYFAKD 180 PPLQLSFDNS SVSEIEELSN GVWSIVGGKA SCRRIFSLDV VLLDAFSHTI NKELEVIASL 240 AYYDNGAHVD KTSDGEPPLL AIHDGIEFAS CDRPTKVVQG RASFKLKISQ LSSKCDNRLF 300 RIIFQIPNWE NYPFLKAFTP PIRCVSPSHN AVVSSIMLGR SPYAPLNVYQ PLGLDDKALE 360 LQNISAPEDK LNPSPKRLKL GNQVENAFVK DLVGRANSVE EVDDSRSNSE NPEARNSTLK 420 STSSSRIPMS DVTVFKYCLA GLTEKSLLLK EIATSASNEE LQDFALQVSL YSGCSHHSSY 480 WRHQIIMAKK LVEEGTKAWK LISQNSDQVQ WESVVFEIEE QFMKIACCSS RSLTKQGSYF 540 TVYTAQWELK NGMQDFELLK RIAGCKEYLA QENFEKMWCW LYPVAFTLSK DGINTMWSST 600 SPKWIEGFIT KEEAESSLQP SRGFQEPGTF VLRFPTSRSW PHPDAGSLVV TYLGSKCTIH 660 HKLISLDTIA SSEEKNTKPL QDMLLDNKKS LSSLGCLSTI PFLGNNVFHV LKRLVTQLGS 720 ALPCSLAIRS ALFMMGCPYI AGGEAITFSY ASSTEFHLSV SS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004295681.1 | 0.0 | PREDICTED: uncharacterized protein LOC101298500 | ||||
TrEMBL | A0A251PL13 | 0.0 | A0A251PL13_PRUPE; Uncharacterized protein | ||||
STRING | XP_004295681.1 | 0.0 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6710 | 30 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78540.1 | 0.0 | SH2 domain protein B |