PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000241.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family STAT
Protein Properties Length: 762aa    MW: 84851.7 Da    PI: 6.4209
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000241.1.g00010.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT171.71.3e-532183351118
                            STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcd 79 
                                     ldvvll+a++++++k++ev+asL y d+g++v+k++d e+pLL+  dG+ef+s drp+k+++GrasfklkisqLsskcd
  FANhyb_rscf00000241.1.g00010.1 218 LDVVLLDAFSHTINKELEVIASLAYYDNGAHVDKTSDGEPPLLAIHDGIEFASCDRPTKVVQGRASFKLKISQLSSKCD 296
                                     8****************************************************************************** PP

                            STAT  80 nrLfrikfeipklkkypfleavskpirCisrsrntrsss 118
                                     nrLfri f+ip+ ++ypfl+a++ pirC+s s+n+  ss
  FANhyb_rscf00000241.1.g00010.1 297 NRLFRIIFQIPNWENYPFLKAFTPPIRCVSPSHNAVVSS 335
                                     ********************************9987665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF133853.0E-66135No hitNo description
Gene3DG3DSA:2.60.120.2002.8E-719161IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF498992.45E-1022164IPR013320Concanavalin A-like lectin/glucanase domain
Gene3DG3DSA:3.30.505.103.4E-7596668IPR000980SH2 domain
SuperFamilySSF555507.32E-8598696IPR000980SH2 domain
PROSITE profilePS500019.485604697IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 762 aa     Download sequence    Send to blast
MATKSDEYLP LKDFRVEIDD KQPTFSVCFW LYLSSSTTFP ATLIQVHSGA AGNSPFLVIR  60
ENKKLRLYLM GLLPRKAADQ CGSASLSEVP HIDVWSQFPM EKWVHVGWEV SSDFVRLHID  120
GEDVGNKDIS SLFNKDSIST GLSKISLAFC GGDGNNMQGY VHHPNVLPLT SSIMEYFAKD  180
PPLQLSFDNS SVSEIEELSN GVWSIVGGKA SCRRIFSLDV VLLDAFSHTI NKELEVIASL  240
AYYDNGAHVD KTSDGEPPLL AIHDGIEFAS CDRPTKVVQG RASFKLKISQ LSSKCDNRLF  300
RIIFQIPNWE NYPFLKAFTP PIRCVSPSHN AVVSSIMLGR SPYAPLNVYQ PLGLDDKALE  360
LQNISAPEDK LNPSPKRLKL GNQVENAFVK DLVGRANSVE EVDDSRSNSE NPEARNSTLK  420
STSSSRIPMS DVTVFKYCLA GLTEKSLLLK EIATSASNEE LQDFALQVSL YSGCSHHSSY  480
WRHQIIMAKK LVEEGTKAWK LISQNSDQVQ WESVVFEIEE QFMKIACCSS RSLTKQGSYF  540
TVYTAQWELK NGMQDFELLK RIAGCKEYLA QENFEKMWCW LYPVAFTLSK DGINTMWSST  600
SPKWIEGFIT KEEAESSLQP SRGFQEPGTF VLRFPTSRSW PHPDAGSLVV TYLGSKCTIH  660
HKLISLDTIA SSEEKNTKPL QDMLLDNKKS LSSLGCLSTI PFLGNNVFHV LKRLVTQLGS  720
ALPCSLAIRS ALFMMGCPYI AGGEAITFSY ASSTEFHLSV SS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004295681.10.0PREDICTED: uncharacterized protein LOC101298500
TrEMBLA0A251PL130.0A0A251PL13_PRUPE; Uncharacterized protein
STRINGXP_004295681.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67103036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.10.0SH2 domain protein B