PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000194.1.g00018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | Dof | ||||||||
Protein Properties | Length: 293aa MW: 32063.2 Da PI: 8.236 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.7 | 5.9e-39 | 34 | 95 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k++al+cprC+st tkfCyynnyslsqPryfCk+C+ryWt GG+lrnvPvGgg+rknk+sss FANhyb_rscf00000194.1.g00018.1 34 KDQALNCPRCNSTTTKFCYYNNYSLSQPRYFCKTCKRYWTDGGSLRNVPVGGGSRKNKRSSS 95 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-26 | 28 | 86 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.4E-33 | 35 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.63 | 38 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 40 | 76 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MDTAHWPQGI GVKSMGAEVP DSRPILERRG RPQKDQALNC PRCNSTTTKF CYYNNYSLSQ 60 PRYFCKTCKR YWTDGGSLRN VPVGGGSRKN KRSSSSSPST SNSSKKLAHH DLVMTQQSAD 120 SQNPKIHQGQ DLNLAYPPTS DQEYDHHSIF NPSSSRISTS SPHNLSAMEL LKSTGINASR 180 GLMNSFMAPI SAADSNTITM FSTGNNHGFP NLHEFKPSLS FSLDGYESGY GSLQGVGTSH 240 HHAGLLFPTD QDLKQIPSTT TETTTTSTEF EQNRGEGDHS GVYWNGMLGG GSW |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004307953.1 | 0.0 | PREDICTED: dof zinc finger protein DOF1.8-like | ||||
TrEMBL | A0A2P6SP85 | 1e-178 | A0A2P6SP85_ROSCH; Putative transcription factor C2C2-Dof family | ||||
STRING | XP_004307953.1 | 0.0 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF674 | 34 | 137 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64620.1 | 2e-41 | Dof family protein |