PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000022.1.g00031.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family BES1
Protein Properties Length: 296aa    MW: 31432.7 Da    PI: 6.0217
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000022.1.g00031.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822123.23.4e-38211036150
                          DUF822  36 qGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysasp 114
                                     +Gnyklpk++DnneVlkALc+eAGw+ve DGttyrkg+kp e+++++  sa asp+ss++        +s  +sy++sp
  FANhyb_rscf00000022.1.g00031.1   2 YGNYKLPKHCDNNEVLKALCNEAGWTVELDGTTYRKGCKPVERMDIVDGSAAASPCSSYH--------PSNYASYNPSP 72 
                                     8***********************************************************........999******** PP

                          DUF822 115 ksssfpspssldsislasa..asllpvlsvlslvsssl 150
                                      sssfpsp+s++ + +++   +sl+p+l++ls+ sss+
  FANhyb_rscf00000022.1.g00031.1  73 GSSSFPSPASSSYAAHQNVdgSSLIPWLKHLSSGSSSA 110
                                     ********9999888876678**********9966654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.0E-401104IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MYGNYKLPKH CDNNEVLKAL CNEAGWTVEL DGTTYRKGCK PVERMDIVDG SAAASPCSSY  60
HPSNYASYNP SPGSSSFPSP ASSSYAAHQN VDGSSLIPWL KHLSSGSSSA SSSKLPNMYI  120
HGGSISAPVT PPLSSPTCRT PRMNTDWEQS ARPGWGGQQH SFLPSSTPPS PGRQIIPSPE  180
WFSGIQIPHG PTSPTFSLVS SNPFGFKEEA LAGGGSRMWT PGQSGTCSPA IAAGSDHTGD  240
IPMSEVISDE FAFGSCNTEG LVKAWEGERI HEESGSDDLE LTLGCSKTRQ VNSWTK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-16342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-16342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-16342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-16342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004294130.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-134BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2P6Q9T40.0A0A2P6Q9T4_ROSCH; Putative transcription factor BES/BZR family
STRINGXP_004294130.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-116BES1/BZR1 homolog 4