PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon20341735_s.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | G2-like | ||||||||
Protein Properties | Length: 121aa MW: 13870.7 Da PI: 10.8436 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 65.1 | 1.3e-20 | 83 | 120 | 2 | 39 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk FANhyb_icon20341735_s.1.g00001.1 83 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVK 120 9***********************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.05E-7 | 80 | 120 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.7E-16 | 81 | 120 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 9.8E-14 | 83 | 120 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
MGGFESTRFN GITMESLRVP QHQLQYLNHQ QQQQLQHQHQ CGAGVGIGAH HHLHGDFSSN 60 NGFIMRSRFT PKSYQSKRNM RAPRMRWTSS LHARFVHAVE LLGGHERATP KSVLELMDVK 120 D |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011464470.1 | 2e-64 | PREDICTED: transcription repressor KAN1 isoform X2 | ||||
TrEMBL | A0A2P6P1N4 | 2e-46 | A0A2P6P1N4_ROSCH; Putative transcription factor MYB-HB-like family | ||||
STRING | XP_004299501.1 | 7e-63 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1756 | 33 | 91 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 2e-28 | G2-like family protein |