PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon18453807_s.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | Trihelix | ||||||||
Protein Properties | Length: 77aa MW: 8927.04 Da PI: 10.0191 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 35.4 | 2.9e-11 | 1 | 64 | 27 | 86 |
trihelix 27 kkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 k+++W++v+k ++ +++ qC++k+e+l+kry+++k+++++ + s++++f+ ++ FANhyb_icon18453807_s.1.g00001.1 1 KAADWDHVAKTTaatsSSSSPPKTALQCRHKMEKLRKRYRAEKQRASNYPGRFFSSWALFHLMD 64 5789*****99966655666688999**********************9999999******998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.6E-12 | 2 | 66 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence Send to blast |
KAADWDHVAK TTAATSSSSS PPKTALQCRH KMEKLRKRYR AEKQRASNYP GRFFSSWALF 60 HLMDEMESDP DRKPIDE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004301730.2 | 1e-34 | PREDICTED: trihelix transcription factor ASIL2-like | ||||
TrEMBL | A0A2P6P8Z0 | 2e-30 | A0A2P6P8Z0_ROSCH; Putative transcription factor Trihelix family | ||||
STRING | XP_004301730.1 | 2e-33 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13797 | 14 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 1e-14 | Trihelix family protein |