PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00059882_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | ERF | ||||||||
Protein Properties | Length: 57aa MW: 6356.24 Da PI: 11.5881 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.8 | 7.1e-10 | 25 | 57 | 2 | 35 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgk 35 +y+GVr+++ +g+++AeIrd + g +r +lg+ FANhyb_icon00059882_a.1.g00001.1 25 KYRGVRRRP-WGKFAAEIRDSTRHG-EgARLWLGT 57 8********.**********43333.35****997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 14.17 | 25 | 57 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.3E-12 | 25 | 57 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.2E-7 | 25 | 57 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.2E-5 | 25 | 57 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-6 | 26 | 37 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-6 | 51 | 57 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 57 aa Download sequence Send to blast |
VLLGQMEGDS SRGSKAKQEG KKGVKYRGVR RRPWGKFAAE IRDSTRHGEG ARLWLGT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011457996.1 | 1e-29 | PREDICTED: ethylene-responsive transcription factor ERF096-like | ||||
TrEMBL | A0A3S8T950 | 3e-29 | A0A3S8T950_FRAAN; Transcription factor ERF82 | ||||
STRING | XP_004292207.1 | 1e-17 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF270 | 33 | 215 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23220.1 | 4e-09 | ERF family protein |