PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00035228_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | ERF | ||||||||
Protein Properties | Length: 128aa MW: 14180.9 Da PI: 10.7198 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.5e-17 | 72 | 115 | 2 | 49 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 ++GVr ++ +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a FANhyb_icon00035228_a.1.g00001.1 72 TFRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVA 115 59****998.**********843...6******************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.2E-25 | 72 | 118 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.769 | 72 | 128 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.9E-22 | 72 | 128 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.1E-11 | 72 | 115 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.95E-17 | 72 | 118 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 2.4E-10 | 73 | 84 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.92E-23 | 73 | 115 | No hit | No description |
PRINTS | PR00367 | 2.4E-10 | 95 | 111 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence Send to blast |
GRGASMIMAM EPSTRPFEEY ECGLGANGCL KSVSRGRNQA GQEDNNGSNN EPNTKKRQRS 60 INDHGDGGKH PTFRGVRMRS WGKWVSEIRE PRKKSRIWLG TYPTAEMAAR AHDVATRSTN 120 AFLGQMGV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004307005.1 | 3e-48 | PREDICTED: ethylene-responsive transcription factor ERF034-like | ||||
TrEMBL | A0A3Q8TBF3 | 6e-47 | A0A3Q8TBF3_FRAAN; Transcription factor ERF21 | ||||
STRING | XP_004307005.1 | 1e-47 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF192 | 34 | 263 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 6e-31 | ERF family protein |