PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00033956_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | Nin-like | ||||||||
Protein Properties | Length: 85aa MW: 9160.43 Da PI: 10.3671 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 26.6 | 1.1e-08 | 49 | 74 | 1 | 26 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLg 26 aek i+le+l+kyFs+++kdAAk+Lg FANhyb_icon00033956_a.1.g00001.1 49 AEKAITLEVLRKYFSGSLKDAAKSLG 74 5899*********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence Send to blast |
MPSAKSSKLR PQDLNVKGVD CVGEFSTIVE GSFSSVGASK TGEKRRTKAE KAITLEVLRK 60 YFSGSLKDAA KSLGGALSND YFAWR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011465572.1 | 1e-39 | PREDICTED: protein NLP5-like isoform X1 | ||||
Refseq | XP_011465573.1 | 1e-39 | PREDICTED: protein NLP5-like isoform X2 | ||||
TrEMBL | A0A2P6PBG7 | 8e-35 | A0A2P6PBG7_ROSCH; Putative transcription factor Nin-like family | ||||
STRING | XP_004301980.1 | 3e-39 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 1e-13 | Nin-like family protein |