PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00027654_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | B3 | ||||||||
Protein Properties | Length: 151aa MW: 17399.8 Da PI: 7.0062 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 33.4 | 7.9e-11 | 6 | 90 | 8 | 93 |
-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHH.HT--TT-EEEEEE CS B3 8 sdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvka.ngLkegDfvvFkl 84 s++l++ + ++pk+f+ +h g+ + l+le ++grsW+ + + ++++++++kGW +F + ++ + ++F++ FANhyb_icon00027654_a.1.g00001.1 6 SHMLSNIWQRIPKSFVHAHlHGDRSRCAWLSLEGLEGRSWKCDV--KYNGDHCLISKGWVQFFTDiSDIHAALYFIFQY 82 789999999***********66666778****************..888889**********99845788999999998 PP -SS.SEE..E CS B3 85 dgr.sefelv 93 g+ ++f + FANhyb_icon00027654_a.1.g00001.1 83 GGHeMQF--T 90 8766666..3 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02362 | 2.2E-9 | 4 | 90 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.98E-8 | 6 | 92 | No hit | No description |
SuperFamily | SSF101936 | 5.1E-9 | 8 | 83 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.2E-9 | 13 | 94 | IPR015300 | DNA-binding pseudobarrel domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
IYMYISHMLS NIWQRIPKSF VHAHLHGDRS RCAWLSLEGL EGRSWKCDVK YNGDHCLISK 60 GWVQFFTDIS DIHAALYFIF QYGGHEMQFT VTRFADGLKE NGVLGTYNLK LETHPTVNWE 120 VTVEVHANSL LRVTNGWKAF AMETEINAST C |