PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00025050_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NAC | ||||||||
Protein Properties | Length: 199aa MW: 22781 Da PI: 9.4004 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.6 | 3e-16 | 20 | 155 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkk..leleevikevd...iykvePwdLpkkvka....eekewyfFskrdkkya..tg 71 F+Ptd +lv +yL k++ + +++++e+d i+ +ePw + +++a +++ yfF++ ++ +a +g FANhyb_icon00025050_a.1.g00001.1 20 TFKPTDAQLVGHYLYGKIRMMGqvGNGKQAFPELDvygITGMEPWLIWDCLEAirfpHQDFSYFFTRVKRLSAkgKG 96 5****************9877755333445666652226678***99753333333344456***998887763357 PP NAM 72 krknr.atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 kr +r + + g W++ ++kev++ +e g + L + + +++ ++ W+++e+++ FANhyb_icon00025050_a.1.g00001.1 97 KRCSRtVGSGGKWSENESSKEVYVDgFQEPFGRTRKLRYESSDKEFEHHGAWMIEEFSI 155 899994445789***********9855677**********9999999**********87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-18 | 9 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 19.939 | 15 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-11 | 20 | 155 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
GSGSRELMRL EELPCGVVRT FKPTDAQLVG HYLYGKIRMM GQVGNGKQAF PELDVYGITG 60 MEPWLIWDCL EAIRFPHQDF SYFFTRVKRL SAKGKGKRCS RTVGSGGKWS ENESSKEVYV 120 DGFQEPFGRT RKLRYESSDK EFEHHGAWMI EEFSIEHPGV VSSDLVLCRM KRNGKSNNKK 180 RKAVEDEEVN AKRAKCFQA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011465731.1 | 1e-146 | PREDICTED: uncharacterized protein LOC105351863 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF22054 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01010.1 | 8e-06 | NAC domain containing protein 1 |