PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00018234_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family Dof
Protein Properties Length: 240aa    MW: 26059.6 Da    PI: 6.7096
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00018234_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof58.91e-181323263
                            zf-Dof 32 fCkaCrryWtkGGalrnvPvGggrrknkksss 63
                                      fCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  FANhyb_icon00018234_a.1.g00001.1  1 FCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 32
                                      9***************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074789.0E-8124IPR003851Zinc finger, Dof-type
PfamPF027018.0E-13129IPR003851Zinc finger, Dof-type
PROSITE profilePS5088416.302129IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
FCKSCRRYWT KGGTLRNVPV GGGCRKNKRS SSKRSSQDPQ QPLTPNSNPL LPSLSYDSND  60
LSLAFARLQR SCGQMGFDDH LSMLANPTTN SQSDILSNSS SASPSPGFLD ALRTGFLETH  120
NNNGFPNNLY YGFGSNGGNN MVGEVEMDNG VCGEMGLHPY EELSNVAATT AVTVTTMKQE  180
LSRDIETNNN KVLWGFPWQM NNGDHHNLNM GGGGGGVHHE FDNSGRESWN GLGNPSWHGL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004294679.11e-138PREDICTED: dof zinc finger protein DOF5.3-like
TrEMBLA0A2P6QHW31e-136A0A2P6QHW3_ROSCH; Putative transcription factor C2C2-Dof family
STRINGXP_004294679.11e-137(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50263051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.11e-12Dof family protein