PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00018234_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | Dof | ||||||||
Protein Properties | Length: 240aa MW: 26059.6 Da PI: 6.7096 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 58.9 | 1e-18 | 1 | 32 | 32 | 63 |
zf-Dof 32 fCkaCrryWtkGGalrnvPvGggrrknkksss 63 fCk+CrryWtkGG+lrnvPvGgg+rknk+sss FANhyb_icon00018234_a.1.g00001.1 1 FCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 32 9***************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 9.0E-8 | 1 | 24 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 8.0E-13 | 1 | 29 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 16.302 | 1 | 29 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
FCKSCRRYWT KGGTLRNVPV GGGCRKNKRS SSKRSSQDPQ QPLTPNSNPL LPSLSYDSND 60 LSLAFARLQR SCGQMGFDDH LSMLANPTTN SQSDILSNSS SASPSPGFLD ALRTGFLETH 120 NNNGFPNNLY YGFGSNGGNN MVGEVEMDNG VCGEMGLHPY EELSNVAATT AVTVTTMKQE 180 LSRDIETNNN KVLWGFPWQM NNGDHHNLNM GGGGGGVHHE FDNSGRESWN GLGNPSWHGL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004294679.1 | 1e-138 | PREDICTED: dof zinc finger protein DOF5.3-like | ||||
TrEMBL | A0A2P6QHW3 | 1e-136 | A0A2P6QHW3_ROSCH; Putative transcription factor C2C2-Dof family | ||||
STRING | XP_004294679.1 | 1e-137 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5026 | 30 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28510.1 | 1e-12 | Dof family protein |