PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00012996_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | G2-like | ||||||||
Protein Properties | Length: 110aa MW: 12010 Da PI: 6.5082 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 53.1 | 7e-17 | 1 | 30 | 27 | 56 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRla 56 AtPk+i+elm+v+gLt+++vkSHLQkYRl+ FANhyb_icon00012996_a.1.g00001.1 1 ATPKQIRELMQVDGLTNDEVKSHLQKYRLH 30 9***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 7.7E-15 | 1 | 33 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.05E-7 | 1 | 33 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.0E-13 | 1 | 30 | IPR006447 | Myb domain, plants |
PROSITE profile | PS51294 | 10.239 | 1 | 32 | IPR017930 | Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence Send to blast |
ATPKQIRELM QVDGLTNDEV KSHLQKYRLH VRKVPASSAA EANGLWMNQD HCGDNSKANT 60 SQSRSPQGPF PRTEFAKGGQ STTGGDSTET EEDDQKSDGY SWKGACHNSS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004288067.1 | 1e-73 | PREDICTED: probable transcription factor KAN4 | ||||
Swissprot | Q9FX84 | 1e-15 | HHO6_ARATH; Transcription factor HHO6 | ||||
TrEMBL | A0A2P6RN79 | 2e-61 | A0A2P6RN79_ROSCH; Putative transcription factor MYB-HB-like family | ||||
STRING | XP_004288067.1 | 4e-73 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1208 | 34 | 107 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49560.1 | 5e-18 | G2-like family protein |
Publications ? help Back to Top | |||
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