PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00011800_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 173aa    MW: 19292.6 Da    PI: 4.4355
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00011800_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.43.2e-071233254
                               AP2 32 slgkfgtaeeAakaaiaarkkle 54
                                      +lg+f tae+Aa+a+++a++ + 
  FANhyb_icon00011800_a.1.g00001.1  1 WLGTFETAEDAARAYDEAARLMC 23
                                      9******************8775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.996132IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-10134IPR016177DNA-binding domain
SMARTSM003807.7E-7138IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-16132IPR001471AP2/ERF domain
CDDcd000186.51E-17134No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
WLGTFETAED AARAYDEAAR LMCGPRARTN FPYNPNASQS SASKLLSQTL TAKLHRCYMA  60
SLQMTKSTSL KQPSKPQLSF VDSKNVGIVE DEKPSIQVPE KKPAVPEEQE EEPNWGFVNK  120
VKVESTQDEE SIEPLEDDHI EQMIEELLHY GSIELCSVQS VVTPPQTPQA SLI
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004291940.11e-114PREDICTED: ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW51e-48ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A3Q8TED61e-114A0A3Q8TED6_FRAAN; Transcription factor ERF37
STRINGXP_004291940.11e-114(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.14e-31ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]