PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00011703_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 130aa    MW: 13994.6 Da    PI: 9.9784
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00011703_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.6e-161867255
                               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                      + kGVr++k +g+Wv+eIr+p   g +  r +lg+f tae Aa a++ a  +l++
  FANhyb_icon00011703_a.1.g00001.1 18 KLKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSTAEAAAVARDVAYYCLRK 67
                                      679*****9.**********8...3.35*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.17E-211877No hitNo description
PfamPF008471.2E-71865IPR001471AP2/ERF domain
PROSITE profilePS5103219.9941877IPR001471AP2/ERF domain
SMARTSM003803.4E-231883IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-161877IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-231977IPR001471AP2/ERF domain
PRINTSPR003673.1E-81930IPR001471AP2/ERF domain
PRINTSPR003673.1E-84157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MSYSSEDSSS PTAGNGRKLK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFST AEAAAVARDV  60
AYYCLRKPST LEGLNFPTIL PCSVNQAADM SPRSIQKAAS DAGMAVDAQL INANSNSNSS  120
SPQNWRQANG
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004299862.13e-90PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotQ9C9I84e-43ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A3S8T9785e-88A0A3S8T978_FRAAN; Transcription factor ERF11
STRINGXP_004299862.11e-89(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-36ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]