PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00011110_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 93aa    MW: 10318.8 Da    PI: 9.0615
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00011110_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like52.11.4e-1612402755
                           G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                                      AtPk +l++m+v+gLt++hvkSHLQkYRl
  FANhyb_icon00011110_a.1.g00001.1 12 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 40
                                      9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015571.3E-111241IPR006447Myb domain, plants
SuperFamilySSF466895.73E-71241IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-151241IPR009057Homeodomain-like
PfamPF143792.1E-107293IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
YVNFISNFIL GATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYLPESPAD GSKDEKKGSG  60
DSLSCSDSSP GVQINEALRM QMEVQKRLHE QLE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008240601.16e-55PREDICTED: protein PHR1-LIKE 1-like isoform X2
RefseqXP_021832481.16e-55myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW09e-37PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A251N5I02e-53A0A251N5I0_PRUPE; Uncharacterized protein
STRINGXP_008240600.11e-51(Prunus mume)
STRINGXP_009345372.19e-52(Pyrus x bretschneideri)
STRINGXP_009347649.19e-52(Pyrus x bretschneideri)
STRINGXP_009347650.19e-52(Pyrus x bretschneideri)
STRINGXP_008385743.11e-51(Malus domestica)
STRINGXP_008392505.11e-51(Malus domestica)
STRINGXP_004294699.11e-51(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130132330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.18e-34G2-like family protein