PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00003888_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | ERF | ||||||||
Protein Properties | Length: 129aa MW: 14212.3 Da PI: 10.2785 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26 | 2.3e-08 | 98 | 128 | 1 | 36 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 ++y+G+r + +Wv+eIr+p++ +kr++lg+f FANhyb_icon00003888_a.1.g00001.1 98 PRYRGIRCR--GEKWVSEIREPRK---TKRIWLGTF 128 68****954..58********843...5*******9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 11.047 | 99 | 129 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.7E-11 | 99 | 128 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-6 | 99 | 129 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence Send to blast |
MADPNTPANN LRQMIEDQPA PTQFILDFPP PPPSPTLPQP PQPPPPPPSH SLALLPLVIP 60 STSEATVVQQ LQLETPKEAT AQQGKSTPMA SSSSGKHPRY RGIRCRGEKW VSEIREPRKT 120 KRIWLGTFP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011463809.1 | 9e-67 | PREDICTED: ethylene-responsive transcription factor ERF027-like | ||||
TrEMBL | A0A3Q8TED3 | 4e-64 | A0A3Q8TED3_FRAAN; Transcription factor ERF17 | ||||
STRING | XP_004298779.1 | 3e-66 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF562 | 32 | 144 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12630.1 | 5e-16 | ERF family protein |