PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00002940_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 160aa    MW: 18093.2 Da    PI: 6.6834
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00002940_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like857.6e-27107156251
                           G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                       prlrWtp+LH +F++a+e LGG+e+AtPk +l+lm+v gL+++hvkSHLQ
  FANhyb_icon00002940_a.1.g00001.1 107 PRLRWTPQLHLSFLHALELLGGQERATPKLVLQLMNVRGLSISHVKSHLQ 156
                                       8************************************************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-23103156IPR009057Homeodomain-like
PROSITE profilePS5129410.3103160IPR017930Myb domain
SuperFamilySSF466897.88E-13105157IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-20107158IPR006447Myb domain, plants
PfamPF002494.8E-7108157IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MRNELELIGD LGDQKRKTDK ISEEQAENIW VESSQKCSSF DLNEDVSDNS DNDNGNTNVN  60
NLADHEPSSV RNDERRALAQ ENMNNAANII SNSSRAKVRP YVRSKLPRLR WTPQLHLSFL  120
HALELLGGQE RATPKLVLQL MNVRGLSISH VKSHLQVVIL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-17108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-17108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-17108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-17108156351Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-17108156452Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011460614.11e-93PREDICTED: two-component response regulator ARR12-like isoform X2
TrEMBLA0A2P6Q4Q82e-71A0A2P6Q4Q8_ROSCH; Putative transcription factor MYB-HB-like family
STRINGXP_004293956.19e-93(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-23G2-like family protein