PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00001345_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

Dof

Protein Properties

Length: 285aa MW: 32960.1 Da PI: 9.9748

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00001345_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	52.7	9.1e-17	214	269	4	58
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrn.vPvGggrrkn 58 ++l+cprC+s+ntkf ++ Pry Ck+C+ Wt GG ++ + +Gg rk+ FANhyb_icon00001345_a.1.g00001.1 214 QKLQCPRCESNNTKFSVLKAKRIAGPRYHCKNCKMEWTLGGKIKKpIVLGGVNRKD 269 789***************************************98647788888886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.0E-16	214	268	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	5.0E-9	214	268	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	16.451	216	270	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence Send to blast
ENKTLMKLVA DKEYPFEIQR IESYMIDFEE LNSLKIIVNK LEKQNFKLTQ ANTQMLQQLR 60 SLRNHAQKVQ QPNLRPIQET IQVQEVQQPN LQLAQEVIQV NEIQQPNLQP AQARIHVQEF 120 EPPNMQAGQA TIQMQEEEPV LENSQIFLEL RSNADMLSST DEAVRECIHM IEQLQASGPP 180 TDEAIQQVKA KLQALGPLTI DAVRQIRAGF RKLQKLQCPR CESNNTKFSV LKAKRIAGPR 240 YHCKNCKMEW TLGGKIKKPI VLGGVNRKDL LQQRVQRVQR RRMKN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004288648.1	0.0	PREDICTED: uncharacterized protein LOC101292636
TrEMBL	A0A2P6REW5	1e-143	A0A2P6REW5_ROSCH; Putative transcription factor C2C2-Dof family
STRING	XP_004288648.1	0.0	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF32425	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	1e-12	Dof family protein