PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000457_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family Nin-like
Protein Properties Length: 286aa    MW: 32152 Da    PI: 8.4763
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000457_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK30.38.4e-101183552
                            RWP-RK 35 iCRqyGIkRWPhRkiksl 52
                                      iCRq+GIkRWP+Rkik++
  FANhyb_icon00000457_a.1.g00001.1  1 ICRQHGIKRWPSRKIKKV 18
                                      7***************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020427.6E-7118IPR003035RWP-RK domain
PROSITE profilePS5151910.705138IPR003035RWP-RK domain
SuperFamilySSF542776.87E-24185272No hitNo description
SMARTSM006661.8E-23189272IPR000270PB1 domain
PROSITE profilePS5174527.639189272IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.6E-23189269No hitNo description
PfamPF005643.5E-20190270IPR000270PB1 domain
CDDcd064079.66E-42191270No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
ICRQHGIKRW PSRKIKKVGH SLEKLQRVID SVQGASSAFQ INSFYTNYPE LASPNLSGTS  60
PFSTSKLIDR PRPSDMPPDG SVLSPQATAS KSPSSSCSQS TSSSQCCSSK TEQHLPTWSV  120
AGNDDPIVGD NRMLKRVRSE AELDALRQDG VDELMQRSQS HKNLSEQQKL QSFRPSLKYD  180
GQIAQEGDAR KVKVTYGDEK TRFRIQNNWK YEDLGQEIAK RFGINDMCRF DIKYLDDDSE  240
WVLLTCDADL EECLDVCRSS RCSTIKLSLQ LSRRKLERFS GSSGPS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011465572.10.0PREDICTED: protein NLP5-like isoform X1
RefseqXP_011465573.10.0PREDICTED: protein NLP5-like isoform X2
TrEMBLA0A2P6PBG71e-168A0A2P6PBG7_ROSCH; Putative transcription factor Nin-like family
STRINGXP_004301980.11e-156(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12373399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.15e-59Nin-like family protein