PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00000378_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | bZIP | ||||||||
Protein Properties | Length: 201aa MW: 23030.6 Da PI: 6.054 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.2 | 5.5e-16 | 62 | 122 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++re+rkq+NRe+A+rsR R+++e+e+L+e ++ L +e ++L +el +l++e+ kl+ ++ FANhyb_icon00000378_a.1.g00001.1 62 RRRREKRKQSNRESAKRSRFRRQQECEKLRETAEMLNSEISELPNELRRLSEECGKLDEKN 122 579*******************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.7E-11 | 57 | 124 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.7E-12 | 57 | 120 | No hit | No description |
Pfam | PF00170 | 3.5E-12 | 62 | 122 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.013 | 62 | 125 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.75E-9 | 64 | 118 | No hit | No description |
CDD | cd14702 | 8.24E-15 | 65 | 115 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 67 | 82 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MFNQIDQETA VQNNSRVLYS GTNTDLNLLN IGVHMPETHL NLGMDLNVSS VYAIRTEEDH 60 DRRRREKRKQ SNRESAKRSR FRRQQECEKL RETAEMLNSE ISELPNELRR LSEECGKLDE 120 KNSSLIDEME KMYGPDAVAD LRAVKVNSSD DGSNSIESKP PRRDNSTSPT PSHRNEIFPT 180 PPHRIEASPT PLEPRLFGVT L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 65 | DRRRRE |
2 | 61 | 66 | RRRREK |
3 | 61 | 69 | RRRREKRKQ |
4 | 62 | 68 | RRREKRK |
5 | 62 | 69 | RRREKRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024167114.1 | 1e-110 | G-box-binding factor 1-like | ||||
TrEMBL | A0A2P6PNU4 | 1e-108 | A0A2P6PNU4_ROSCH; Putative transcription factor bZIP family | ||||
STRING | XP_004289625.1 | 3e-80 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15757 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.1 | 3e-17 | G-box binding factor 1 |