PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00000292_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | G2-like | ||||||||
Protein Properties | Length: 234aa MW: 26234 Da PI: 6.9587 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 33.3 | 1.1e-10 | 210 | 234 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r++W+peLH+rF++a++qLGGs+ FANhyb_icon00000292_a.1.g00001.1 210 KQRRNWSPELHRRFLHALQQLGGSH 234 79*********************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.0E-7 | 208 | 232 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MLMNSTEEMQ GSKLGLYVKA LEEEKQKIQV FQRELPLCLE LVTQAIERCK QEISDNSIEY 60 RHGQSECSEQ TSSEGHVFEE FIPLKRSSSS DSDDEELEES DHLRNKTNDK DKSHSGDKKK 120 SDWLRSVQLW NTTPDVPKKE ELPRKASVVE VKRNGGAFHP FQKEKSIGNT NGAVVKSPAS 180 APATSSTADT VSGGSGGGNS KKEDKEGQRK QRRNWSPELH RRFLHALQQL GGSH |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00160 | DAP | Transfer from AT1G25550 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004297138.1 | 1e-149 | PREDICTED: probable transcription factor GLK2 | ||||
Swissprot | Q9FPE8 | 3e-71 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A2P6R1V1 | 1e-145 | A0A2P6R1V1_ROSCH; Putative transcription factor MYB-HB-like family | ||||
STRING | XP_004297138.1 | 1e-148 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3918 | 33 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 6e-55 | G2-like family protein |
Publications ? help Back to Top | |||
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