PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000292_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 234aa    MW: 26234 Da    PI: 6.9587
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000292_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.31.1e-10210234125
                           G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                                       k+r++W+peLH+rF++a++qLGGs+
  FANhyb_icon00000292_a.1.g00001.1 210 KQRRNWSPELHRRFLHALQQLGGSH 234
                                       79*********************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-7208232IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MLMNSTEEMQ GSKLGLYVKA LEEEKQKIQV FQRELPLCLE LVTQAIERCK QEISDNSIEY  60
RHGQSECSEQ TSSEGHVFEE FIPLKRSSSS DSDDEELEES DHLRNKTNDK DKSHSGDKKK  120
SDWLRSVQLW NTTPDVPKKE ELPRKASVVE VKRNGGAFHP FQKEKSIGNT NGAVVKSPAS  180
APATSSTADT VSGGSGGGNS KKEDKEGQRK QRRNWSPELH RRFLHALQQL GGSH
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00160DAPTransfer from AT1G25550Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004297138.11e-149PREDICTED: probable transcription factor GLK2
SwissprotQ9FPE83e-71HHO3_ARATH; Transcription factor HHO3
TrEMBLA0A2P6R1V11e-145A0A2P6R1V1_ROSCH; Putative transcription factor MYB-HB-like family
STRINGXP_004297138.11e-148(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.16e-55G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]