PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462967610
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 306aa    MW: 34260.1 Da    PI: 9.4411
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462967610genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.52.6e-5311281128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                + pGfrFhPtdeelv +yLk+k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ +++ 
  462967610   1 MLPGFRFHPTDEELVRFYLKRKIQQKSLPI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSdGNKC 99 
                579***************************.89***************9888999***************************************956667 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                +glkk+Lvfykgra kg+ktdW+mhe+rl
  462967610 100 IGLKKSLVFYKGRAAKGVKTDWMMHEFRL 128
                ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100551.7171148IPR003441NAC domain
SuperFamilySSF1019412.22E-552133IPR003441NAC domain
PfamPF023656.6E-263128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MLPGFRFHPT DEELVRFYLK RKIQQKSLPI ELIRQLDIYK YDPWDLPKLA STGEKEWYFY  60
CPRDRKYRNS TRPNRVTGAG FWKATGTDRP IYSSDGNKCI GLKKSLVFYK GRAAKGVKTD  120
WMMHEFRLPS LTDPSVPQKK PLEKTIPPNF TGSSYLSSIV PSSSHNPLSI IDSSSRPAAS  180
SVLPSSGAEH QNMSVLSAIP LDLPAGMNIA SMVLNATPIS LQNLARIPTN IEFGQPQHCN  240
NISLVNRCTV DLPDVGSTVN SASRSINFPF NLQGALPEDW RTTLPWDSLP CTTEVSTTYQ  300
PTKCYT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-51312817140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462967610
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022679437.11e-171putative NAC domain-containing protein 94
TrEMBLK3YYF71e-170K3YYF7_SETIT; Uncharacterized protein
STRINGSi019308m1e-171(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137172629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.14e-87NAC domain containing protein 94