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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462963922 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
LFY |
| Protein Properties |
Length: 317aa MW: 34740.5 Da PI: 9.8372 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462963922 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 476.2 | 2e-145 | 1 | 303 | 81 | 385 |
FLO_LFY 81 mkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekk 180
m+++eldd+m++l+ +fr+d+l+Ger+G++aa+raer r+++ r l+ +t lda+sqe+ls+e+++ +g +++g ++l+++++
462963922 1 MTERELDDMMAALAGLFRWDVLLGERFGLRAALRAERGRVMALGGGGGRF--LQ-TGSTCLDAVSQEVLSDERDAAASGGMGDDETGRRLHQLAGKKQ-- 95
9*****************************************98666666..44.45678************88654444444444433333333332.. PP
FLO_LFY 181 seeekkkaskk..kqkrkkkkelkse....ededeeeeed.edeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiaker 273
+++k a++k k++rk++ + ded e+d ++++++g +g erqrehPf+vtepgevar+kknGLDYLf+LyeqCr fLlqvq+iak
462963922 96 -QAKKGAATRKgkKARRKRELR---PldvlGDEDGAGESDsTESSTGGGGGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRVFLLQVQTIAKMA 191
.222222222211222222222...124555555555544055556777888************************************************ PP
FLO_LFY 274 GekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtk 373
G+k+Ptkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrra+k+rgenvGawrqacy+plv+iaar+g+d+davf+ahprLsiWYvPt+
462963922 192 GHKSPTKVTNQVFRYAKKCGASYINKPKMRHYVHCYALHCLDEEASNALRRAYKARGENVGAWRQACYAPLVEIAARHGFDVDAVFAAHPRLSIWYVPTR 291
**************************************************************************************************** PP
FLO_LFY 374 LrqLChlerska 385
LrqLCh++r +
462963922 292 LRQLCHQARGGH 303
********9766 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
| GO:0010582 | Biological Process | floral meristem determinacy |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0031490 | Molecular Function | chromatin DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0043621 | Molecular Function | protein self-association |
| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MTERELDDMM AALAGLFRWD VLLGERFGLR AALRAERGRV MALGGGGGRF LQTGSTCLDA 60
VSQEVLSDER DAAASGGMGD DETGRRLHQL AGKKQQAKKG AATRKGKKAR RKRELRPLDV 120
LGDEDGAGES DSTESSTGGG GGGERQREHP FVVTEPGEVA RAKKNGLDYL FHLYEQCRVF 180
LLQVQTIAKM AGHKSPTKVT NQVFRYAKKC GASYINKPKM RHYVHCYALH CLDEEASNAL 240
RRAYKARGEN VGAWRQACYA PLVEIAARHG FDVDAVFAAH PRLSIWYVPT RLRQLCHQAR 300
GGHAHAAAAG LPPPPMY
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G61850.1 | 2e-98 | floral meristem identity control protein LEAFY (LFY) |
