PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462963332
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 109aa    MW: 11999.8 Da    PI: 12.2505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462963332genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.46.4e-123578955
        AP2  9 dkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +++ grW++e+r  +    +rkr ++g+f ta++Aa a++aa  +++g
  462963332 35 RPRLGRWASELRLkC----RRKRLWIGTFATAQQAALAYDAAIYCIYG 78
               7899*********33....45**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.6591190IPR001471AP2/ERF domain
SMARTSM003803.5E-103096IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-113590IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.9E-173591IPR001471AP2/ERF domain
PfamPF008471.7E-73578IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
MVARQGNSRS GRRGTSGSAA AVGAGRKNLG WMGARPRLGR WASELRLKCR RKRLWIGTFA  60
TAQQAALAYD AAIYCIYGND IPRTRRFNFP HMPRPNVSEE ARAAGIPVV
Cis-element ? help Back to Top
SourceLink
PlantRegMap462963332
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822464.13e-26ethylene-responsive transcription factor ERF011-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-08ERF family protein