PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462958983
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family CAMTA
Protein Properties Length: 403aa    MW: 45696.7 Da    PI: 5.8688
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462958983genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.22.5e-56191362118
       CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                lke ++rwl++ ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kk+dgktv+E+he+LK g+++v++cyYah+een++fqrr+yw
  462958983  19 LKEaQHRWLRPAEICEILKNYRNFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVIHCYYAHGEENENFQRRSYW 118
                45559*********************************************************************************************** PP

       CG-1 101 lLeeelekivlvhylevk 118
                +Lee++ +ivlvhylevk
  462958983 119 MLEEDFMHIVLVHYLEVK 136
                ***************985 PP
2CG-154.62.1e-1715119178118
       CG-1  78 vevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                ++v++cyYah+een++fqrr+yw+Lee++ +ivlvhylevk
  462958983 151 IDVIHCYYAHGEENENFQRRSYWMLEEDFMHIVLVHYLEVK 191
                89************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143783.18115141IPR005559CG-1 DNA-binding domain
SMARTSM010766.0E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038592.4E-5021135IPR005559CG-1 DNA-binding domain
PfamPF038594.9E-14151190IPR005559CG-1 DNA-binding domain
PROSITE profilePS5143721.407151196IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MAEGRRYAIA PQLDVQQILK EAQHRWLRPA EICEILKNYR NFRIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKSGSIDVIH CYYAHGEENE NFQRRSYWML  120
EEDFMHIVLV HYLEVKGGKS SSRIRGHDDI IDVIHCYYAH GEENENFQRR SYWMLEEDFM  180
HIVLVHYLEV KGGKSSSRIR GHDDMLQAAR TDSPLSHLPS QTTEGESSLS GQASEYEETE  240
SDIYSGGAGY YPFSRVQQHE NGGGPLIGAS IMSSYIPAPS VANHQGLPAT TANTGFYSHG  300
EDNLPVYHDE SGVVAFNGAD SQLNFSSLDG VMKPDNRIHQ MSLPQVSTPS EQFSLTEGPG  360
IESFTFDEIY SNGLSIKDAD GAGTDEGSLW QVLWSCISVW HYV
Cis-element ? help Back to Top
SourceLink
PlantRegMap462958983
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985393.11e-174calmodulin-binding transcription activator 3 isoform X2
TrEMBLA0A368SUT71e-173A0A368SUT7_SETIT; Uncharacterized protein
STRINGTraes_4DL_C2F35966E.21e-156(Triticum aestivum)
STRINGGRMZM2G447551_P011e-155(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.22e-77Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains