PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462956563
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family BES1
Protein Properties Length: 398aa    MW: 41942.4 Da    PI: 8.9436
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462956563genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.22.3e-64692151149
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslks 100
                gg+gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg kp+e+++a+g+s s sp+ss+q     
  462956563  69 GGGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGNKPPERMDAMGCSVSPSPCSSYQ----- 163
                689********************************************************************************************..... PP

     DUF822 101 salaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149
                   +sp++sy+asp+sssfps +s+ +++ ++       + +lp+l++ s+ ++s
  462956563 164 ---PSPRASYNASPTSSSFPSGASSPFLPPTDIvngidgNPILPWLKTFSNGTAS 215
                ...9999999999999999999998888777666777778899999988876666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.7E-6370209IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
APLPSPHPPT PPCLLAAALL AIPHPPSLFS HRARLHASLL PLCSAPKPKE LGRPVSLSSS  60
AGMDTGGGGG GGRMPTWRER ENNKRRERRR RAIAAKIFAG LRAHGGYKLP KHCDNNEVLK  120
ALCNEAGWVV EPDGTTYRKG NKPPERMDAM GCSVSPSPCS SYQPSPRASY NASPTSSSFP  180
SGASSPFLPP TDIVNGIDGN PILPWLKTFS NGTASKKHPL LPPLLIHGGS ISAPVTPPLS  240
SPTARTPRMK TDWDESAVQP PWHGAQSPSI INSTPPSPGR STVPDPAWLA GIQIASTSPS  300
SPTFSLVSTN PFSVFKEASI PVGNSSRMCT PGQSGTCSPA IPGMPRHPDV HMMDVSDEFA  360
FGSSTNGGQE AAGLVRAWEG ERIHEDSGSD DLDVTLKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-2273143372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-2273143372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-2273143372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-2273143372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462956563
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817932.10.0protein BZR1 homolog 2
SwissprotQ0JPT41e-164BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBLA0A2S3HYR90.0A0A2S3HYR9_9POAL; Uncharacterized protein
STRINGPavir.Ea00221.1.p1e-177(Panicum virgatum)
STRINGSb03g002480.11e-178(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-76BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]