PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462944289
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 480aa    MW: 52855.6 Da    PI: 5.3583
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462944289genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.81.1e-158219510128
        NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlskkgelvglkktLvf 108
                +d elv ++L+++ ++++l+l +v+  vd   ++P+ +  ++  e + w+  ++ d++     ++  r +k+gyWk   +++  ++  ++ +g k ++ f
  462944289  82 SDGELV-RFLAERKAEDPLPL-DVMMGVDCSVLDPRCFTGCT--EATVWHLKVSGDQEIYDgAENGIRNAKNGYWKPLYSSRIPMN--TAITGFKIVFEF 175
                699***.999999999****9.99**************8554..56899988877776655155667899*******998776655..889********* PP

        NAM 109 ykgrapkgektdWvmheyrl 128
                y+g+ap g++t+W+mhey++
  462944289 176 YEGQAPCGKRTEWMMHEYQV 195
                ******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.62973216IPR003441NAC domain
SuperFamilySSF1019411.57E-2273216IPR003441NAC domain
PfamPF023651.6E-782195IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MGAHRARIGA ARSRSPSPTP PACCALVWCG PAASLGRTRS PAAHPPPRRP RLPRQRVIML  60
PPICGPCEKL AALDICIRDS WSDGELVRFL AERKAEDPLP LDVMMGVDCS VLDPRCFTGC  120
TEATVWHLKV SGDQEIYDGA ENGIRNAKNG YWKPLYSSRI PMNTAITGFK IVFEFYEGQA  180
PCGKRTEWMM HEYQVEQNDE ANLPQDYKSL CKVFPQSDKN TESGQNSLNA NEPHDTLESY  240
LQYLARIEEP KDTVSANEDD SSSTGQHEQK TAADDVIARG DYIELNDLIG PCIEQHEQNT  300
ENAADDVGVH DDIATDDYIE LNDLLNSEAT SSTSASTSKR SMISEEYFDS DAFLREILED  360
SNIPDGHNRD NKFSIAAPTK SANVVVGPTE QGLVHIHGDN ATVAGTSRQK QVPGGDADQH  420
SSKECQQQSS SISSCFPTRH VKRSHSNSSD SSQNSEKSRK MRPNSKFGKI GKSRTLAKIL
Cis-element ? help Back to Top
SourceLink
PlantRegMap462944289
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004983252.11e-149protein BEARSKIN2
TrEMBLA0A368SL501e-148A0A368SL50_SETIT; Uncharacterized protein
STRINGPavir.Ib03017.1.p1e-149(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109162632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.18e-15NAC domain containing protein 17