PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462937974

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

BES1

Protein Properties

Length: 281aa MW: 29532.3 Da PI: 6.622

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462937974	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	27.4	1.1e-08	24	99	72	149
DUF822 72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149 g kp+e+++a+g+s s sp+ss+q +sp++sy+asp+sssfps +s+ +++ ++ + +lp+l++ s+ ++s 462937974 24 GNKPPERMDAMGCSVSPSPCSSYQ--------PSPRASYNASPTSSSFPSGASSPFLPPTDIvngidgNPILPWLKTFSNGTAS 99 68999*******************........9999999999999999999998888777666777778899999988886666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.4E-9	24	93	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence Send to blast
MNRASVQSRL VLLLLTSLFK DLVGNKPPER MDAMGCSVSP SPCSSYQPSP RASYNASPTS 60 SSFPSGASSP FLPPTDIVNG IDGNPILPWL KTFSNGTASK KHPLLPPLLI HGGSISAPVT 120 PPLSSPTART PRMKTDWDES AVHPPWHGAQ SPSIINSTPP SPGRSTVPDP AWLAGIQIAS 180 TSPSSPTFSL VSTNPFSVFK EAIPVGNSSR MCTPGQSGTC SPAIPGMPRH PEVHMMDVSD 240 EFAFGSSTNG GQEAAGLVRA WEGERIHEDS GSDDLDVTLK L

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462937974

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	1e-35	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025817932.1	1e-147	protein BZR1 homolog 2
Swissprot	Q0JPT4	1e-127	BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBL	A0A2S3HYR9	1e-146	A0A2S3HYR9_9POAL; Uncharacterized protein
STRING	Pavir.Ea00221.1.p	1e-141	(Panicum virgatum)
STRING	Pavir.Eb00235.1.p	1e-143	(Panicum virgatum)
STRING	Sb03g002480.1	1e-141	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	9e-48	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]