PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462936145
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 723aa    MW: 79622.1 Da    PI: 4.5803
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462936145genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.83.6e-5291421128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 
                lp GfrFhPtdeelv +yLk k++g+ +++ evi+e+d++k+ePwdLp k  +++++ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+ ++sk   
  462936145   9 LPLGFRFHPTDEELVRHYLKGKITGQINSEVEVIPEIDVCKCEPWDLPdKsLIRSDDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRVIKSKgdk 108
                699************************9999****************96446677888**************************************9876 PP

        NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 k++ +g+kktLvf++grapkge+t W+mheyr 
  462936145 109 rKQHIIGMKKTLVFHRGRAPKGERTGWIMHEYRT 142
                66666***************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-593163IPR003441NAC domain
PROSITE profilePS5100557.1549163IPR003441NAC domain
PfamPF023651.4E-2710141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    Send to blast
MTVMELKKLP LGFRFHPTDE ELVRHYLKGK ITGQINSEVE VIPEIDVCKC EPWDLPDKSL  60
IRSDDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIKSKGDKRK QHIIGMKKTL  120
VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FHKTVEKTER PSPEEMDRSG  180
DSPTPSRSSP DNMEPNEEAH TPLNKESPES ALLDSPINLP ASVEAHAVPM TMWLADRTDN  240
LAPNAANVSQ MPSNGHLDGV AKVDPSAGSF PLIDSKVQHG DPNHLVPGSA SIIPHEGNGF  300
FADFHQGVSG FDGNTNAHDE LDVILNQIID PEEHSSTTSK VQYDSDTGIM PFEFENHGVM  360
QGELLDDQSW WADLSFMPDE PNPQLSGLYE NTPLLPYDTT DQDVLSMDSG AESLHDLFNN  420
MEDSSGKKDV WSNEPALQGT GITVMPRHLQ SSMQPNSFLS HQGIAPRRLR LQECLSTNVQ  480
SGESVTNVDC EDETSCIINS KHLDEAVEES TADKGVPSDE DDAESTGIII RSRRPALSSS  540
AAGLITQQGT AGEDDAESTG IIIKSRHPDQ SSSAAGLFTQ QGTATRRLRL QSDLKTGPCS  600
TTDDSSSCII DETESQHNAR TSEIEEDDAG TNFAESVDLF GSSHNDEIKN MPEHDDLKSV  660
PEAKSVLRLR KSPEKSDKDI KQEDGVDSLV RAPGPKGGFR SHIMVTVLVA LLLLLGVGIY  720
GWV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-45916320168NAC domain-containing protein 19
3swm_B2e-45916320168NAC domain-containing protein 19
3swm_C2e-45916320168NAC domain-containing protein 19
3swm_D2e-45916320168NAC domain-containing protein 19
3swp_A2e-45916320168NAC domain-containing protein 19
3swp_B2e-45916320168NAC domain-containing protein 19
3swp_C2e-45916320168NAC domain-containing protein 19
3swp_D2e-45916320168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462936145
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820792.10.0protein NTM1-like 9
TrEMBLA0A0A9CTY00.0A0A0A9CTY0_ARUDO; Uncharacterized protein
STRINGPavir.Fb00405.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.23e-71NAC 014