PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462933116
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 318aa    MW: 35247.5 Da    PI: 7.9358
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462933116genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.95.6e-51101371128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrF P+deelv++yL+kkv+++++    ++ evd++  ePw+Lp  +k + +ewyfFs rd+kyatg+r+nratk+gyWkatgkd+ev s+ ++++
  462933116  10 LPPGFRFYPSDEELVCHYLHKKVSNERIAQ-GTLVEVDLHAREPWELPDVAKLTASEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDREVRSTaTRAV 108
                79*************************998.88***************77777889*************************************9867788 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                vg++ktLvfy+grap+g+k+ Wvmhe+rl
  462933116 109 VGMRKTLVFYQGRAPNGVKSCWVMHEFRL 137
                ***************************98 PP
2NAM48.23.6e-1514619085128
        NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                atgkd+ev s+ ++++vg++ktLvfy+grap+g+k+ Wvmhe+rl
  462933116 146 ATGKDREVRSTaTRAVVGMRKTLVFYQGRAPNGVKSCWVMHEFRL 190
                8********9867788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-547142IPR003441NAC domain
PROSITE profilePS5100554.86710209IPR003441NAC domain
PfamPF023657.3E-2811137IPR003441NAC domain
SuperFamilySSF1019412.62E-20146209IPR003441NAC domain
PfamPF023651.2E-5157190IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MALREIESTL PPGFRFYPSD EELVCHYLHK KVSNERIAQG TLVEVDLHAR EPWELPDVAK  60
LTASEWYFFS FRDRKYATGS RTNRATKTGY WKATGKDREV RSTATRAVVG MRKTLVFYQG  120
RAPNGVKSCW VMHEFRLDTP HSPPRATGKD REVRSTATRA VVGMRKTLVF YQGRAPNGVK  180
SCWVMHEFRL DTPHSPPRED WVLCRVFQKT KGDGDGQDGA SSASPTFAGS SHAMPEQEHT  240
TSAGCYGYLG NVQEQDMAQM LTYYGGTGDN AGGALPGLEF GARGVAGDEY GLGYFDMAGF  300
DDMASHGLGG MGFPQGWN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-45513710140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462933116
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0629551e-158AK062955.1 Oryza sativa Japonica Group cDNA clone:001-109-C12, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002452475.11e-115NAC domain-containing protein 100
TrEMBLA0A3B6B1N21e-116A0A3B6B1N2_WHEAT; Uncharacterized protein
STRINGMLOC_12466.21e-116(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69738166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-68NAC domain containing protein 74