PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462929476
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 80aa    MW: 9419.75 Da    PI: 7.2487
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462929476genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.81.4e-12127102128
        NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                +kktLv+y+grap+g++tdWvmheyrl
  462929476   1 MKKTLVYYRGRAPQGVRTDWVMHEYRL 27 
                8************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-18151IPR003441NAC domain
PfamPF023656.2E-5127IPR003441NAC domain
PROSITE profilePS5100521.631150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
MKKTLVYYRG RAPQGVRTDW VMHEYRLDDK DAEDTLPIQD TYALCRVFKK NAIYTEVDDL  60
QLQAQCGMAS VWAFLARSWQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462929476
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7280597e-81KJ728059.1 Zea mays clone pUT6205 NAC transcription factor (NAC121) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004957582.16e-38NAC domain-containing protein 86
RefseqXP_025803496.15e-38NAC domain-containing protein 86-like
SwissprotQ9FFI51e-18NAC86_ARATH; NAC domain-containing protein 86
TrEMBLA0A2S3H2331e-36A0A2S3H233_9POAL; Uncharacterized protein
TrEMBLA0A2T7EVM31e-36A0A2T7EVM3_9POAL; Uncharacterized protein
TrEMBLA0A368Q5911e-36A0A368Q591_SETIT; Uncharacterized protein
TrEMBLA0A3L6T4V41e-36A0A3L6T4V4_PANMI; Uncharacterized protein
TrEMBLK4A2I72e-36K4A2I7_SETIT; Uncharacterized protein
STRINGPavir.Ba01384.1.p2e-37(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47313664
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.13e-30NAC domain containing protein 57
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]