PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462920652
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 440aa    MW: 47582.9 Da    PI: 6.2542
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462920652genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.71.4e-09185225545
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  462920652 185 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 225
                7889************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-8181244IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312183227IPR004827Basic-leucine zipper domain
PfamPF001709.2E-7185225IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.64E-7185228No hitNo description
CDDcd147082.17E-21185237No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-7186229No hitNo description
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
PfamPF141441.3E-10267311IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MESRQGGAAA TAAEDAGGAM PSFGPPQHAI HRDVNSMQPS GVTDFGALAQ SAGSRIEDLA  60
NLNTNTFFNL KPSIHTNNND PLQFGSYRKP ISSLHTSTTA AATVASRIDP SSLAQQTGAQ  120
PNLLSVTSGN IENWGELAMA AASPMTDTST DPDTDEGNQM FEQGQLAGPT VSDSSDKSRD  180
KLDQKTLRRL AQNREAARKS RLRKKAYIQN LESSRLKLTQ LEQELQRARQ QGIFISSSGD  240
QPQSTSGNGA LAFDMEYARW LEEHNKHTNE LRAAVNAHAG DNDLRSIVDS IMAHYDEIFK  300
LKGVAAKADL LAGQLEPLTD QQLLGISNLQ QSSQQAEDAL SQGMEALQQS LAETLASGSL  360
GPAGSSGNVA NYMGQMAMAM GKLGTLENFL RQADNLRLQT LQQMQRILTT RQSARALLAI  420
SDYFSRLRAL SSLWHARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462920652
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458658.10.0transcription factor TGAL1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC5XMK20.0C5XMK2_SORBI; Uncharacterized protein
STRINGSb03g037560.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-119bZIP family protein