 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462920556 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
LFY |
| Protein Properties |
Length: 324aa MW: 35455.5 Da PI: 9.7656 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462920556 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 453.8 | 1.3e-138 | 1 | 292 | 81 | 376 |
FLO_LFY 81 mkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekk 180
m+++eldd+m++l+ +fr+d+l+Ger+G++aa+raer r+++ + r + +t +da+sqe+ls+e+++ ++ +++g ++l++++++
462920556 1 MTERELDDMMAALAGLFRWDVLLGERFGLRAALRAERGRVMALG--AGRF----QTGSTCVDAVSQEVLSDERDAAASGGMADDETGRRLHQLAGKKQQA 94
9****************************************976..4554....345678************9977555444444444444444444333 PP
FLO_LFY 181 seeekkkaskkkqkrkkkkelkse....ededeeeeed.edeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGe 275
++ +++ kk++rk++ + ded e+d ++++++g +g erqrehPf+vtepgevar+kknGLDYLf+LyeqCr fLlqvq+iak G+
462920556 95 KKGAGGTRKGKKARRKRELR---PldvlGDEDGAGESDsTESSTGGGGGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRVFLLQVQTIAKMGGH 191
33332222222333333332...123455555555544055556777888************************************************** PP
FLO_LFY 276 kcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLr 375
k+Ptkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrra+k+rgenvGawrqacy+plv+iaar+g+didavf+ahprLsiWYvPt+Lr
462920556 192 KSPTKVTNQVFRYAKKCGASYINKPKMRHYVHCYALHCLDEEASNALRRAYKARGENVGAWRQACYAPLVEIAARHGFDIDAVFAAHPRLSIWYVPTRLR 291
**************************************************************************************************** PP
FLO_LFY 376 q 376
+
462920556 292 R 292
7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MTERELDDMM AALAGLFRWD VLLGERFGLR AALRAERGRV MALGAGRFQT GSTCVDAVSQ 60
EVLSDERDAA ASGGMADDET GRRLHQLAGK KQQAKKGAGG TRKGKKARRK RELRPLDVLG 120
DEDGAGESDS TESSTGGGGG GERQREHPFV VTEPGEVARA KKNGLDYLFH LYEQCRVFLL 180
QVQTIAKMGG HKSPTKVTNQ VFRYAKKCGA SYINKPKMRH YVHCYALHCL DEEASNALRR 240
AYKARGENVG AWRQACYAPL VEIAARHGFD IDAVFAAHPR LSIWYVPTRL RRGAPAATHV 300
LSDLHRLLAG GLTLLVCLVD VVVG
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY179882 | 0.0 | AY179882.1 Zea mays cultivar A632 floricaula/leafy-like 1 (fl1) mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 5e-96 | floral meristem identity control protein LEAFY (LFY) |
