PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462917397
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 309aa    MW: 33210.7 Da    PI: 5.3473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462917397genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-16111158555
        AP2   5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+ + +g
  462917397 111 GVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAAFSARG 158
                9*****.**********32..2.24***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.351108166IPR001471AP2/ERF domain
PRINTSPR003671.2E-7109120IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-20109168IPR016177DNA-binding domain
PfamPF008473.2E-12110158IPR001471AP2/ERF domain
SMARTSM003801.1E-29111172IPR001471AP2/ERF domain
CDDcd000181.32E-13111143No hitNo description
Gene3DG3DSA:3.30.730.103.0E-27111167IPR001471AP2/ERF domain
PRINTSPR003671.2E-7132148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MEQEQHTSSS SATSYYYYYP AAAAPPDASF PFDTVHNDDM LLQLESFLLD IDTDVSAEAC  60
SDLSSPSSSA SSEAGAGTTM GLANTHNHQH RLPEAGSATP SGQQKRPALI GVRKRPWGKF  120
AAEIRDSTRK GARVWLGTFD TPEAAALAYD QAAFSARGAA AVLNFPVERV QESLGAMALA  180
AGNGSPVLAL KRRHSKRTRR RKPISPISNH NMNKMTTHQQ PAPQCSDDTS SVSVPTMAVL  240
PRQQETTAAQ CSDTSAVSSA TVQVPRQQQV AATSCKFDST INAVELEDLG ADYLDEILWA  300
SSGLEYWDE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-241111681774Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462917397
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276832e-96KJ727683.1 Zea mays clone pUT5611 AP2-EREBP transcription factor (EREB59) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004979115.15e-54ethylene-responsive transcription factor ERF094
TrEMBLA0A2T7CMG41e-52A0A2T7CMG4_9POAL; Uncharacterized protein
TrEMBLA0A368S6161e-52A0A368S616_SETIT; Uncharacterized protein
STRINGPavir.Hb01336.1.p2e-59(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-35ethylene response factor 1