PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462916573 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | NAC | ||||||||
Protein Properties | Length: 536aa MW: 58798.2 Da PI: 9.7309 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 93.3 | 4e-29 | 50 | 131 | 50 | 128 |
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrl 128 kvk +ekewyf++ +d+ky+t r n at++gyWkatgkd+e+++ +++ g+k+tLvfyk+rapkg+kt+Wvmheyrl 462916573 50 KVKMGEKEWYFYCLKDRKYPTWLRVNHATEAGYWKATGKDREIYHGASSVpvlLGMKNTLVFYKERAPKGVKTNWVMHEYRL 131 6778999**************************************744446779**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 30.453 | 1 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.4E-13 | 49 | 131 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.37E-32 | 51 | 168 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence Send to blast |
MSLLGDQSDA NNDAGAAMAL ASSAVAGGMS DAWTQCTRRK GRLNFHRKAK VKMGEKEWYF 60 YCLKDRKYPT WLRVNHATEA GYWKATGKDR EIYHGASSVP VLLGMKNTLV FYKERAPKGV 120 KTNWVMHEYR LDGKGRVPYS ATSSNTKSKK PCSSSKVEEW VVCRVFDKSP GVRKEPESAH 180 VSAPSYRMTM SGGGVDPRSM SFPMPTPLPM DIQDLTRNSN GLHPLMGNLS ASFYSTDSVG 240 SSVPPPLMPP LFPPLLPMAG MDNIELLMNT DYFGNPAAIT KPGSFCQQVE AATTRYCGFM 300 EYIHRPSPGP PASSAASAPP PRFCTVWLYS WGRGGANSLV ARLAAACEDG GCPSEKGQEL 360 DAARRWLGLP GSRSPPRICA MSPPLEAWWR SASSTTARPL LSLLVDGAAL LRPDPTKLDK 420 DGRQPPAAGR EERRHYRPLN NCKGPIVPQR MSIGRPSRKT EVHGASSVPV LLGMKKTDLV 480 FYNGRLPKSC IMSVRFGENF LLTREQYIQW QILAEGEGEV ERRRGDDGLG YGLDGG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 6e-24 | 50 | 174 | 65 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-24 | 50 | 174 | 65 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-24 | 50 | 174 | 65 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-24 | 50 | 174 | 65 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
3swm_B | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
3swm_C | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
3swm_D | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
3swp_A | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
3swp_B | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
3swp_C | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
3swp_D | 7e-24 | 50 | 174 | 68 | 174 | NAC domain-containing protein 19 |
4dul_A | 6e-24 | 50 | 174 | 65 | 171 | NAC domain-containing protein 19 |
4dul_B | 6e-24 | 50 | 174 | 65 | 171 | NAC domain-containing protein 19 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462916573 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 4e-44 | NAC domain containing protein 100 |