PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462916573
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 536aa    MW: 58798.2 Da    PI: 9.7309
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462916573genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.34e-295013150128
        NAM  50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                kvk +ekewyf++ +d+ky+t  r n at++gyWkatgkd+e+++  +++    g+k+tLvfyk+rapkg+kt+Wvmheyrl
  462916573  50 KVKMGEKEWYFYCLKDRKYPTWLRVNHATEAGYWKATGKDREIYHGASSVpvlLGMKNTLVFYKERAPKGVKTNWVMHEYRL 131
                6778999**************************************744446779**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100530.4531168IPR003441NAC domain
PfamPF023656.4E-1349131IPR003441NAC domain
SuperFamilySSF1019418.37E-3251168IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    Send to blast
MSLLGDQSDA NNDAGAAMAL ASSAVAGGMS DAWTQCTRRK GRLNFHRKAK VKMGEKEWYF  60
YCLKDRKYPT WLRVNHATEA GYWKATGKDR EIYHGASSVP VLLGMKNTLV FYKERAPKGV  120
KTNWVMHEYR LDGKGRVPYS ATSSNTKSKK PCSSSKVEEW VVCRVFDKSP GVRKEPESAH  180
VSAPSYRMTM SGGGVDPRSM SFPMPTPLPM DIQDLTRNSN GLHPLMGNLS ASFYSTDSVG  240
SSVPPPLMPP LFPPLLPMAG MDNIELLMNT DYFGNPAAIT KPGSFCQQVE AATTRYCGFM  300
EYIHRPSPGP PASSAASAPP PRFCTVWLYS WGRGGANSLV ARLAAACEDG GCPSEKGQEL  360
DAARRWLGLP GSRSPPRICA MSPPLEAWWR SASSTTARPL LSLLVDGAAL LRPDPTKLDK  420
DGRQPPAAGR EERRHYRPLN NCKGPIVPQR MSIGRPSRKT EVHGASSVPV LLGMKKTDLV  480
FYNGRLPKSC IMSVRFGENF LLTREQYIQW QILAEGEGEV ERRRGDDGLG YGLDGG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-245017465171NO APICAL MERISTEM PROTEIN
1ut4_B6e-245017465171NO APICAL MERISTEM PROTEIN
1ut7_A6e-245017465171NO APICAL MERISTEM PROTEIN
1ut7_B6e-245017465171NO APICAL MERISTEM PROTEIN
3swm_A7e-245017468174NAC domain-containing protein 19
3swm_B7e-245017468174NAC domain-containing protein 19
3swm_C7e-245017468174NAC domain-containing protein 19
3swm_D7e-245017468174NAC domain-containing protein 19
3swp_A7e-245017468174NAC domain-containing protein 19
3swp_B7e-245017468174NAC domain-containing protein 19
3swp_C7e-245017468174NAC domain-containing protein 19
3swp_D7e-245017468174NAC domain-containing protein 19
4dul_A6e-245017465171NAC domain-containing protein 19
4dul_B6e-245017465171NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMap462916573
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.14e-44NAC domain containing protein 100