PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462913543
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 813aa    MW: 91156.4 Da    PI: 5.1777
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462913543genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.21.2e-17691991128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                lp+G++F+P+d +lv  +L++++ +        ++++ v +++  +   ++P+d+p  v+ + +  yfF+kr     ++k+     k+  W++ g+ k++
  462913543  69 LPRGVEFNPSDCDLV-WHLAAEIGNYLahrhpfISEFIVpVNDDgGFSCTHPQDIP-GVRRDGRASYFFHKRFDVLCNNKNG----KNISWQKVGTPKSI 162
                699************.6788877665544445544444545555468889******.667788999******9987654333....3446********** PP

        NAM  93 lskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                +  +++l g+k+ +v+y  + ++++ e+tdW +h+y++
  462913543 163 IL-DETLQGCKEEFVLYayNVSDNSHEQTDWRLHQYHI 199
                **.999**********96667889999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.54E-2363217IPR003441NAC domain
PROSITE profilePS5100519.86769217IPR003441NAC domain
PfamPF023652.9E-870199IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 813 aa     Download sequence    Send to blast
MAAGTSMPPS RLGTDCDPDH LPLAGRRRRP VVPSVPRAEG DPAVYRCEAR ADAWHTDGGS  60
QQPQIWPGLP RGVEFNPSDC DLVWHLAAEI GNYLAHRHPF ISEFIVPVND DGGFSCTHPQ  120
DIPGVRRDGR ASYFFHKRFD VLCNNKNGKN ISWQKVGTPK SIILDETLQG CKEEFVLYAY  180
NVSDNSHEQT DWRLHQYHIS GNVKDDGELM VSKIFHQPQN NLCELVEKLP AEPELPCKDI  240
LNHAETDDLD HMSLKERHII LLADKILCPA TTSAEKSAAA PKRNHAGEMY REDIGRMLQE  300
ISSAPPIVES MDDDNGKRLL GEHLSDAQMS STECFVGNNS NERLGSSSNS ELPTSEPTCA  360
SEDKQLVVRK NGTVLVDVKL EPALEGHELD SSGFPQGIPL HPPKSFGLEG GSSIPGCVSK  420
NSRNEMLHQN RDFVENAADI CKITESSSQD NHCERSVPSL GIKCELTEGD LLGLSENSSI  480
NTVEPIVETT HTQIHDHDGS IAFRSHQQKK RKTASSSGKT FEEDAQNNVK GIAYSSRRRR  540
RRKTATDSIE KALDEDAPGL LQILMDKGIT AEEIKLYGAG EDDEMLPDST ENNFEDLENV  600
ITKLFPQRTS LLKLSVARHE KGEKAIYCLS CLLSLIEQSR YLQFRDCPVE WGWCRDLQSF  660
IFVFRSHNRI VLERPEYGYA TYFFEVVQSL PIEWQVRRLV IAMKLSGCGR TALIENKQLL  720
VGEDLTEGEA QVLEEYGWIR NCGLGTMLNY RDRVVHDRWT ERSVTDWRTK IGKLLMAGYS  780
EGQTITTHVP KKLGDLLEDT GDIEIDVKLE DPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1536541RRRRRR
2536542RRRRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMap462913543
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025795332.10.0uncharacterized protein LOC112875626 isoform X1
TrEMBLA0A2T7CFK70.0A0A2T7CFK7_9POAL; Uncharacterized protein
STRINGPavir.Ib00786.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74793239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.16e-35NAC family protein