PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462896090
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 346aa    MW: 38995.7 Da    PI: 6.4007
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462896090genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.86e-085915736128
        NAM  36 evdiykvePwdLp.kkvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapk.gektdWvmheyrl 128
                ++++ +++Pw+Lp ++++++ k +    +++   + +t +  + +t +g+Wk     + v  k    ++ vglk+t  fy gr+++ +++t W+m+ y l
  462896090  59 NTHLPEMNPWELPgMAHDEHGKAVsgKCYVTDCFQLQT-DIYSPTTPQGFWKPRDLGRGVPGKsddPRRFVGLKRTYRFYMGRSHQaSTETIWTMNVYYL 157
                3467789******4433333332233344444333333.34455799*****999999998874444555**********9976551579******9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.25618176IPR003441NAC domain
SuperFamilySSF1019412.09E-1344174IPR003441NAC domain
PROSITE profilePS5080810.12288346IPR003656Zinc finger, BED-type
SMARTSM006142.8E-9288342IPR003656Zinc finger, BED-type
SuperFamilySSF576672.5E-5291342No hitNo description
PfamPF028921.1E-4301335IPR003656Zinc finger, BED-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MDPISIDLAA GVEDMRFSLS RFDAAPSPAE LLEHLRLRSQ RYMWEREMDG GLLRMAGLNT  60
HLPEMNPWEL PGMAHDEHGK AVSGKCYVTD CFQLQTDIYS PTTPQGFWKP RDLGRGVPGK  120
SDDPRRFVGL KRTYRFYMGR SHQASTETIW TMNVYYLVND KDFVRDDLVL CHVFEDKSAD  180
DDPQPECAGM CHGTPADKVC FLAWHLIAQA GDPHRSIDPR SSGSTQHGSS QHMDPEFSSY  240
IEELEQTLLG DPEICKEVDN DDPNGGGPSN ESVCTENGQT RKRSRNKSNK SPVWERFTKI  300
FAQSPDGILT LAICNHCFKV LKGDSSHGTS HLKRHKCPCN HKQPNT
Cis-element ? help Back to Top
SourceLink
PlantRegMap462896090
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1859089
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.29e-08NAC domain containing protein 35