PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462888815
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 392aa    MW: 42737 Da    PI: 4.3987
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462888815genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.31.4e-14235283151
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51 
                l pGfrF+Ptd+el+ +yLk+k+ g++ + +++i+ev+iy++ PwdLp+++
  462888815 235 LEPGFRFRPTDKELILFYLKRKILGEN-S-FQAIAEVQIYEFCPWDLPEAI 283
                579**********************99.3.368**************9654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF055362.9E-455200IPR008709Neurochondrin
Gene3DG3DSA:1.25.10.106.9E-471173IPR011989Armadillo-like helical
SuperFamilySSF483713.32E-673176IPR016024Armadillo-type fold
SuperFamilySSF1019411.83E-13232283IPR003441NAC domain
PROSITE profilePS5100512.629235392IPR003441NAC domain
PfamPF023656.0E-7237277IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MSAATAPLDD CISLLRGETD AEKLSGLLLA SNVCCAGDAE AAVKVYRAVG PQFLRHLFNA  60
AGLTNAPVMR EGYRRLAVTV LAGLARVPEV AADEGVVSMV PLIVEVMCTS IDPQIIQHCF  120
DLMSNIALAS DAGAFEFCTT EVMDMLLVAS SSPDGSNCLE IVIKLLKLLV HKLHVDTLST  180
KMLQDITGMI VLLSRLFDVN RSSASDAANT PLYPQELPVD VQGDTHRTEI YDKSLEPGFR  240
FRPTDKELIL FYLKRKILGE NSFQAIAEVQ IYEFCPWDLP EAIHEDPAIQ GDVLDGAGLL  300
AVPSQGNGKI DFNKFDEFSM DELFAMTGQK FGNNLYPFAR LDWQSSIPIL ASGSKFWRSD  360
PATCTSASTP TRALCLRELL VVGDVVHDAT DE
Cis-element ? help Back to Top
SourceLink
PlantRegMap462888815
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLK3YQV02e-63K3YQV0_SETIT; Uncharacterized protein
STRINGPavir.Aa00187.1.p6e-65(Panicum virgatum)
STRINGPavir.J09099.1.p3e-68(Panicum virgatum)
STRINGPavir.J37625.1.p7e-67(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.11e-14NTM1-like 8