|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
462887128 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
Family |
AP2 |
Protein Properties |
Length: 430aa MW: 48042.8 Da PI: 10.3529 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
462887128 | genome | Tef | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 23.4 | 1.5e-07 | 22 | 45 | 1 | 29 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrk 29
s+y+GV++++++grW+++I+d+ k
462887128 22 SQYRGVTFYRRTGRWESHIWDC-----GK 45
78*******************4.....14 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MELDLNPPAA KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVAYD RAAIKFRGVD 60 ADINFNLSDY EDDMKQVRNK LNYTRRERVR PVNHLQLNLT CHGLGSLGAP QMKSLSKEEF 120 VHVLRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK AYDRAAIKFR GVDADINFNL 180 SDYEDDMEQM KSLSKEEFVH VLRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKAY 240 DKAAIKCNGR EAVTNFEPST YEGELLTEVG SEGADVDLNL SISQPASQSP KRDKNSLGLQ 300 LHHGSFEGSE LKRGKASIDA PSELAGRPHR YPLLTEHPPI WPAQSHPFFS NNEDATRDHN 360 RRPEGGTGAV PSWAWKVSKP SPTLPLPLFS SSSSSAAASS GFSNTATTAA PATPSATLRF 420 DPSSSSSRHR
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor (By similarity). Involved in spikelet transition. Regulator of starch biosynthesis especially during seed development (e.g. endosperm starch granules); represses the expression of type I starch synthesis genes. Prevents lemma and palea elongation as well as grain growth (By similarity). {ECO:0000250|UniProtKB:P47927, ECO:0000250|UniProtKB:Q2TQ34}. |