PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462886298
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 254aa    MW: 27766.9 Da    PI: 4.2743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462886298genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.48.5e-098342955
        AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
                r++lg+f ++eeAa+a++a +++++g
  462886298  8 VRVWLGTFNSPEEAARAYDAEARRIRG 34
               79**********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.38E-18144No hitNo description
PROSITE profilePS5103213.999142IPR001471AP2/ERF domain
SMARTSM003806.4E-12248IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-17343IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-11343IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MGDPHKGVRV WLGTFNSPEE AARAYDAEAR RIRGKKAKVN FPDTLTGVQK RRAGLTVAKA  60
PKSSFEQKPT VKAALNNPIN TNGSFYPSAD YTSNKQVVQL DNMSFLPAMN PAAPIEDPIM  120
NLHSDQGSNS FSCSDLGWEN ETKTPDITSI TPDSTIAEGD ETEFVNNYSD GSLVPPVMEN  180
NTVDLTDELT DLEPYMRFLL DGGASESIDS LLNLDGSQDV VSDMDLWSFG DMPIFGIKTK  240
DWEIGKHLLG TLGQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462886298
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012698581.11e-122ethylene-responsive transcription factor 1
RefseqXP_022685012.11e-122ethylene-responsive transcription factor 1
SwissprotQ6K7E61e-110ERF1_ORYSJ; Ethylene-responsive transcription factor 1
TrEMBLA0A1E5WBP21e-125A0A1E5WBP2_9POAL; Ethylene-responsive transcription factor 1
STRINGSi017568m1e-122(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.29e-13related to AP2 2
Publications ? help Back to Top
  1. Kim CY, et al.
    Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
    Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
    [PMID:10755311]
  2. Koo SC, et al.
    OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
    Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
    [PMID:19607808]
  3. Iwamoto M,Takano M
    Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
    Biotechnol. Lett., 2011. 33(1): p. 173-8
    [PMID:20872166]
  4. Serra TS, et al.
    OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
    Plant Mol. Biol., 2013. 82(4-5): p. 439-55
    [PMID:23703395]
  5. Jisha V, et al.
    Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
    PLoS ONE, 2015. 10(6): p. e0127831
    [PMID:26035591]
  6. Lourenço TF, et al.
    The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
    Plant Physiol., 2015. 169(3): p. 2275-87
    [PMID:26381316]