PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462886127 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | NAC | ||||||||
Protein Properties | Length: 912aa MW: 103237 Da PI: 8.1077 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.9 | 2.2e-11 | 834 | 884 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLp 48 +ppGfr+hP+d+elv +yL +k+ g+ ++ ++ +vd++k+eP dLp 462886127 834 MPPGFRYHPRDDELVLDYLLHKLCGRGrarAHCGVAMVDVDLNKCEPLDLP 884 79*********************999865444433599************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.60.120.200 | 1.1E-6 | 506 | 547 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
SuperFamily | SSF56112 | 3.78E-68 | 511 | 790 | IPR011009 | Protein kinase-like domain |
PROSITE profile | PS50011 | 32.612 | 533 | 799 | IPR000719 | Protein kinase domain |
SMART | SM00220 | 2.8E-30 | 533 | 797 | IPR000719 | Protein kinase domain |
Pfam | PF00069 | 1.2E-42 | 537 | 740 | IPR000719 | Protein kinase domain |
PROSITE pattern | PS00107 | 0 | 539 | 560 | IPR017441 | Protein kinase, ATP binding site |
Gene3D | G3DSA:3.30.200.20 | 1.8E-20 | 548 | 595 | No hit | No description |
Gene3D | G3DSA:1.10.510.10 | 1.2E-44 | 596 | 790 | No hit | No description |
PROSITE pattern | PS00108 | 0 | 650 | 662 | IPR008271 | Serine/threonine-protein kinase, active site |
SuperFamily | SSF101941 | 6.15E-22 | 822 | 910 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.275 | 834 | 912 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.8E-7 | 835 | 904 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 912 aa Download sequence Send to blast |
MLLEGRPRRQ GRQTQRAAGG AGFVRHKLKR WRPPAAAPAV ASRRREHENF QATNYRSWTA 60 KMYSLAHMYL TQKTTHSGAI GKQVEEYEDC CDELEVPESA VKELARSQHP PLDKYLHQCA 120 KSEVKAQILV LEEFDIAEGI RELVDKFWIR TLVMGAASDK HYSKCVAKLA NRVHNQAAFA 180 FTAYINVMSN SFRPFSRKLI YTSNMNDLKS VSVFVDADEG LWDVNSQEKD HAQVVSGQAA 240 VAQNLVEMYK QRDPAMLEEE LHDASNRVKE SHETPIDIMA PAQASVIRVV EILHQQKEEL 300 ANEWSNTSKE VAELLEQNKQ LTIERDTALR KIRLLENQKK RMVAEWNVSM EQIAELRKQK 360 RQATTERDNA LEELEIFHKK VEQANNVMVE MEIFHKVEQA KTEVKELNKE KEQMMPKLNS 420 AFTQVLEEGR KKDLITGKAH VVREIEVLRR EKHNIITELD HVVIELMEAR RQKALMASER 480 DHISEVAKEL KAQLEQIMSE RDNAVRKIEK LWEPEVQGSQ FTVAELRRAT QKFNDRFKIG 540 QGGSAVVYKG FLRNTTVAIK MLNSASSSRG QSSEFKQEVN ILSRVRHPNV VTFVGACPEV 600 RAIVYEFMPN GSLEDHLERK AGAPPLPWQA RARIITEICF ALSFLHENKI VHGDIKPANI 660 LLDHNLVSKL SDFGMSRLLT QSGTAGNGGI YCTSHPWGTL GYMDPEFHTT GELTLQTDTY 720 SFGVTILRVL TAMSPFNLLR VVQNALERGD LSSVMDTSAG EWPITLVMEL AWLALRCTDK 780 TREMRPDMAG EVWSVVKRLA NEAAGEASVG SNRKHGIGSS VARMSSISTM ETRMPPGFRY 840 HPRDDELVLD YLLHKLCGRG RARAHCGVAM VDVDLNKCEP LDLPGDRTNR ATRSGYWKAT 900 GKDRQVIAGG EA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j5t_A | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
6j5t_D | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
6j5t_I | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
6j5t_J | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
6j5t_M | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
6j5u_C | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
6j5v_C | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
6j6i_A | 2e-42 | 509 | 803 | 64 | 373 | Probable serine/threonine-protein kinase PBL2 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462886127 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | GQ274479 | 4e-51 | GQ274479.1 Eragrostis tef microsatellite CNLTs186 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022683310.1 | 0.0 | U-box domain-containing protein 33-like | ||||
TrEMBL | A0A368RHS6 | 0.0 | A0A368RHS6_SETIT; Uncharacterized protein | ||||
TrEMBL | A0A368RHT0 | 0.0 | A0A368RHT0_SETIT; Uncharacterized protein | ||||
STRING | Si015810m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 1e-23 | NAC family protein |