PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462886127
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 912aa    MW: 103237 Da    PI: 8.1077
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462886127genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.2e-11834884148
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLp 48 
                +ppGfr+hP+d+elv +yL +k+ g+     ++  ++ +vd++k+eP dLp
  462886127 834 MPPGFRYHPRDDELVLDYLLHKLCGRGrarAHCGVAMVDVDLNKCEPLDLP 884
                79*********************999865444433599************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.60.120.2001.1E-6506547IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF561123.78E-68511790IPR011009Protein kinase-like domain
PROSITE profilePS5001132.612533799IPR000719Protein kinase domain
SMARTSM002202.8E-30533797IPR000719Protein kinase domain
PfamPF000691.2E-42537740IPR000719Protein kinase domain
PROSITE patternPS001070539560IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:3.30.200.201.8E-20548595No hitNo description
Gene3DG3DSA:1.10.510.101.2E-44596790No hitNo description
PROSITE patternPS001080650662IPR008271Serine/threonine-protein kinase, active site
SuperFamilySSF1019416.15E-22822910IPR003441NAC domain
PROSITE profilePS5100515.275834912IPR003441NAC domain
PfamPF023652.8E-7835904IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    Send to blast
MLLEGRPRRQ GRQTQRAAGG AGFVRHKLKR WRPPAAAPAV ASRRREHENF QATNYRSWTA  60
KMYSLAHMYL TQKTTHSGAI GKQVEEYEDC CDELEVPESA VKELARSQHP PLDKYLHQCA  120
KSEVKAQILV LEEFDIAEGI RELVDKFWIR TLVMGAASDK HYSKCVAKLA NRVHNQAAFA  180
FTAYINVMSN SFRPFSRKLI YTSNMNDLKS VSVFVDADEG LWDVNSQEKD HAQVVSGQAA  240
VAQNLVEMYK QRDPAMLEEE LHDASNRVKE SHETPIDIMA PAQASVIRVV EILHQQKEEL  300
ANEWSNTSKE VAELLEQNKQ LTIERDTALR KIRLLENQKK RMVAEWNVSM EQIAELRKQK  360
RQATTERDNA LEELEIFHKK VEQANNVMVE MEIFHKVEQA KTEVKELNKE KEQMMPKLNS  420
AFTQVLEEGR KKDLITGKAH VVREIEVLRR EKHNIITELD HVVIELMEAR RQKALMASER  480
DHISEVAKEL KAQLEQIMSE RDNAVRKIEK LWEPEVQGSQ FTVAELRRAT QKFNDRFKIG  540
QGGSAVVYKG FLRNTTVAIK MLNSASSSRG QSSEFKQEVN ILSRVRHPNV VTFVGACPEV  600
RAIVYEFMPN GSLEDHLERK AGAPPLPWQA RARIITEICF ALSFLHENKI VHGDIKPANI  660
LLDHNLVSKL SDFGMSRLLT QSGTAGNGGI YCTSHPWGTL GYMDPEFHTT GELTLQTDTY  720
SFGVTILRVL TAMSPFNLLR VVQNALERGD LSSVMDTSAG EWPITLVMEL AWLALRCTDK  780
TREMRPDMAG EVWSVVKRLA NEAAGEASVG SNRKHGIGSS VARMSSISTM ETRMPPGFRY  840
HPRDDELVLD YLLHKLCGRG RARAHCGVAM VDVDLNKCEP LDLPGDRTNR ATRSGYWKAT  900
GKDRQVIAGG EA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_A2e-4250980364373Probable serine/threonine-protein kinase PBL2
6j5t_D2e-4250980364373Probable serine/threonine-protein kinase PBL2
6j5t_I2e-4250980364373Probable serine/threonine-protein kinase PBL2
6j5t_J2e-4250980364373Probable serine/threonine-protein kinase PBL2
6j5t_M2e-4250980364373Probable serine/threonine-protein kinase PBL2
6j5u_C2e-4250980364373Probable serine/threonine-protein kinase PBL2
6j5v_C2e-4250980364373Probable serine/threonine-protein kinase PBL2
6j6i_A2e-4250980364373Probable serine/threonine-protein kinase PBL2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462886127
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ2744794e-51GQ274479.1 Eragrostis tef microsatellite CNLTs186 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022683310.10.0U-box domain-containing protein 33-like
TrEMBLA0A368RHS60.0A0A368RHS6_SETIT; Uncharacterized protein
TrEMBLA0A368RHT00.0A0A368RHT0_SETIT; Uncharacterized protein
STRINGSi015810m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.11e-23NAC family protein