PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462884889
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 440aa    MW: 49188.7 Da    PI: 4.2591
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462884889genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.66e-5061331128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                lppGfrFhPtd elv++yLk+k+ gkkl + ++i+ev++yk+ PwdLp k ++++++ ew+fF++rdkky++g+r+nrat +gyWk++gkd++++  +++
  462884889   6 LPPGFRFHPTDVELVSYYLKRKIMGKKLIV-DAISEVELYKFAPWDLPdKsCLRSRDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRTIML-NSR 103
                79*************************988.89**************96347777888**************************************.999 PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 vglkktL+f++g+apkg +tdWvm ey++
  462884889 104 IVGLKKTLIFHEGKAPKGDRTDWVMYEYKM 133
                ****************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.24E-613156IPR003441NAC domain
PROSITE profilePS5100557.0286156IPR003441NAC domain
PfamPF023659.6E-267132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MAQTSLPPGF RFHPTDVELV SYYLKRKIMG KKLIVDAISE VELYKFAPWD LPDKSCLRSR  60
DLEWFFFCPR DKKYPNGSRT NRATPNGYWK TSGKDRTIML NSRIVGLKKT LIFHEGKAPK  120
GDRTDWVMYE YKMEDDSLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FNEDEWENAE  180
AQTSMFNLMP SSEVVNPVAD ENDQHDVPAE EPTLQRSSAT FVREESSFDA TAGTCVEDLT  240
FGIVAAPAIQ DGFVSENYVS DEVSNLCSTP EFDGFLLEEL SKFLTDSPLR DDAVGENSGL  300
PPMSESEFQA FQVNTFDLYN ELSGHSGLGG VPNNFVTVAG TMEQNILPAD RQLSTDDFIE  360
LNDLLAPDSS FSCEYPAQNN QFSQYPLAQA TYNVHCNDMA ALSSFEPSSS LQTMPSIFDM  420
FPPASSNGFA TDQRRNHMED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-53215711169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462884889
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7279771e-175KJ727977.1 Zea mays clone pUT6091 NAC transcription factor (NAC38) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014660428.10.0NAC domain-containing protein 82
TrEMBLA0A368QI290.0A0A368QI29_SETIT; Uncharacterized protein
STRINGPavir.J02083.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47313664
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.42e-83NAC domain containing protein 82