PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462876138
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 291aa    MW: 33051.1 Da    PI: 10.0465
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462876138genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.13e-311972255
    G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               prlrWtpeLH +F++ave+LGG+++AtPk +l+lm+vkgL++ hvkSHLQ+YR+
  462876138 19 PRLRWTPELHLCFLRAVERLGGQDRATPKLVLQLMNVKGLSIGHVKSHLQMYRS 72
               9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.6E-301573IPR009057Homeodomain-like
PROSITE profilePS5129412.9441575IPR017930Myb domain
SuperFamilySSF466897.53E-161673IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-231874IPR006447Myb domain, plants
PfamPF002491.5E-92071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAGSSSSSAV RTYVRSKNPR LRWTPELHLC FLRAVERLGG QDRATPKLVL QLMNVKGLSI  60
GHVKSHLQMY RSKKIDDSGQ VTGGSWRDHF HDGGQVYNRG HLSLHHGQTG VRHLLSARLG  120
AWPHWNNFHE QKWLYGHHFL ASKQYYSTAE AEMLIRTRDN YVARAPTSVH RGFLFQNGQI  180
MNHQRRKLPQ ETLPLSDEAN HDDPLDLELT LDIRPRREKR KRSGGSWGKE HDNKVDEEAE  240
SSTATGLSLS LFLSPHPPRN CVSDSDYRVE SVNVDKGKAP AERASTLDLT I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-172074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-172074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-172074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-172074357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-172074458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap462876138
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0379572e-87BT037957.1 Zea mays full-length cDNA clone ZM_BFb0204N03 mRNA, complete cds.
GenBankBT0684402e-87BT068440.1 Zea mays full-length cDNA clone ZM_BFb0191O11 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021321607.11e-102uncharacterized protein LOC8064764
TrEMBLA0A1E5VA201e-117A0A1E5VA20_9POAL; Uncharacterized protein
STRINGSb05g000480.11e-106(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44083671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-37G2-like family protein