PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462874425 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | BES1 | ||||||||
Protein Properties | Length: 125aa MW: 13233 Da PI: 10.5338 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 153.3 | 1.8e-47 | 25 | 98 | 3 | 76 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 r p+wkErEnn+ RERrRRaiaaki+ GLRa Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrk sk 462874425 25 PVRVPSWKERENNRNRERRRRAIAAKIFGGLRAFGNYRLPKHCDNNEVLKALCKEAGWTVEPDGTTYRKVSKTA 98 5699****************************************************************998865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.2E-44 | 26 | 98 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
MNGVGGGGAA GAGAGGNGGG GGSGPVRVPS WKERENNRNR ERRRRAIAAK IFGGLRAFGN 60 YRLPKHCDNN EVLKALCKEA GWTVEPDGTT YRKVSKTASH PLFFFLGDAL LGCEFWLSVS 120 VLIAV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-21 | 27 | 96 | 372 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-21 | 27 | 96 | 372 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-21 | 27 | 96 | 372 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-21 | 27 | 96 | 372 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462874425 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010675300.1 | 3e-39 | PREDICTED: BES1/BZR1 homolog protein 4 | ||||
Swissprot | Q6EUF1 | 7e-29 | BZR4_ORYSJ; Protein BZR1 homolog 4 | ||||
TrEMBL | A0A4D8Z6E1 | 7e-35 | A0A4D8Z6E1_SALSN; Uncharacterized protein | ||||
STRING | XP_010675300.1 | 1e-38 | (Beta vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19350.6 | 1e-25 | BES1 family protein |