PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462867239
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 293aa    MW: 32693.8 Da    PI: 4.9204
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462867239genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.7e-1192141155
        AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                s y+GVr  + +g+W +eIr  +      kr    +++t+eeAa a+ + rkk+  
  462867239  92 SSYRGVRLLE-WGSWQSEIRNpF-----IKRKESTTHDTEEEAAVAYQEKRKKYDA 141
                67*****999.**********44.....5************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.20E-1192132No hitNo description
SuperFamilySSF541716.54E-892139IPR016177DNA-binding domain
PfamPF008475.2E-592142IPR001471AP2/ERF domain
PROSITE profilePS5103212.2693151IPR001471AP2/ERF domain
SMARTSM003800.009593141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-1093136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MSPALLASLL LQPRKRGTRA CGFCFRIARF SAAVVDTSCS NLHYKMTPPM RKVRIFCNDP  60
DATDSSGDED DQNRKKKLIF EVLVPFKKKP SSSYRGVRLL EWGSWQSEIR NPFIKRKEST  120
THDTEEEAAV AYQEKRKKYD AEKLAKKAQL PVLRGTALSS SSSSSCVSTS MSCKQKSQEV  180
HTGVKVTMDT ESTDESILNF STPKVTSVDA SLGQIDEPVS DPVVHADKPS PDDTFPVSDF  240
VSVMHESLDC DYIGLADISH LPLPYENPEL DLDAEPDWSE FDLGSMEREL DDL
Cis-element ? help Back to Top
SourceLink
PlantRegMap462867239
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002462168.15e-66ethylene-responsive transcription factor ERF119
RefseqXP_021308493.15e-66ethylene-responsive transcription factor ERF119
RefseqXP_021308494.15e-66ethylene-responsive transcription factor ERF119
TrEMBLA0A0A9K4R06e-75A0A0A9K4R0_ARUDO; Uncharacterized protein
STRINGSb02g020900.12e-65(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.27e-11ERF family protein