PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462859769
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family BES1
Protein Properties Length: 624aa    MW: 65853.1 Da    PI: 7.786
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462859769genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822192.61.4e-5981742148
     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl..eeaeaagssasas 89 
                g++r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyr           g+kp+  e+++ +g+sas s
  462859769   8 GGTRVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkvirllpyppLGCKPPpaERHDPIGRSASPS 107
                789******************************************************************888777777779**9999999********** PP

     DUF822  90 pesslqsslkssalaspvesysaspksssfpspssldsislasa................asllpvlsvlslvss 148
                p+ss+q        +sp++sy++sp+sssfps+ s+++i+l s+                +sl+p+l++ls++ss
  462859769 108 PCSSYQ--------PSPRASYNPSPASSSFPSSGSSSHITLGSSshitlggnnyiggvegNSLIPWLKNLSSSSS 174
                ******........999***************99999999988889999999******99999****99987555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.3E-648170IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    Send to blast
GGGGGGLGGT RVPTWREREN NRRRERRRRA IAAKIFAGLR AYGNYNLPKH CDNNEVLKAL  60
CNEAGWTVEP DGTTYRKVIR LLPYPPLGCK PPPAERHDPI GRSASPSPCS SYQPSPRASY  120
NPSPASSSFP SSGSSSHITL GSSSHITLGG NNYIGGVEGN SLIPWLKNLS SSSSFASSSK  180
FPQLQHLYFN GGSISAPVTP PSSSPTRTPR IKTDWENPSV QPPWAGANYA SLPNSQPPSP  240
GHQVAPDPAW LAGFQISSAG PSSPTYSLVA PNPFGIFKET VASSSRMCTP GQSGTCSPVM  300
GGVPAHHDVQ MVDGTPDDFA FGSSSNGNNE SPGLVKAWEG ERIHEECVSD ELELTLGSSK  360
TRSSSHITLG GNNYIGGVEG NSLIPWLKNL SSSSSFASSS KFPQLQHLYF NGGSISAPVT  420
PPSSSPTRTP RIKTDWENPS VMPPWAGANY ASLPNSQPPS PGHQVAPDPA WLAGFQISSA  480
GPSSPTYSLV APNPFGIFKE TVASSSRMCT PGQSGTCSPV MGGVPAHHDV QMVDGTPDDF  540
AFGSSSNGNN ESPGLVKAWE GERIHEECVS DELELTLGSS KTQSVGVISL GLLSEVLLRQ  600
ISYSIVVAHG KFNHDLKVLR SVKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-211195372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-211195372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-211195372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-211195372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462859769
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025813584.10.0protein BZR1 homolog 3
SwissprotQ5Z9E50.0BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A1E5VA880.0A0A1E5VA88_9POAL; Protein BZR1-like protein 3
STRINGPavir.J12085.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-33BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]